FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10922 contig Ccv1_Contig10922:306..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.287e-52
Identity = 95/200 (47.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD+S  T A      G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L  D G+P++YR   G G +TY  +N AG+  YVKFH+K   G+ C  + EA ++ G +   A +DL+ +I  G +P W L +Q+M
Sbjct:   67 FTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVM 266          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.213e-51
Identity = 95/201 (47.26%), Postives = 132/201 (65.67%), Query Frame = 1
Query:   16 FFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            +FEVTHD++    A      G +TPV  RFSTV  E GS +T RDPRGFA+KFYT EGN+D+VGNN P+FFVRD +KFPD +H  K +P++H+ +   + DFFS  PES+H  +FL+ D G P  +RHM G G +T+  INK  +A YVK+H+K   G+K L    A ++   +  +A +DL+++IA   +P W   IQ+M
Sbjct:   73 YFEVTHDITRFCKAKLFEKIGKRTPVFARFSTVAGESGSADTRRDPRGFALKFYTEEGNWDMVGNNTPIFFVRDAIKFPDFIHTQKRHPQTHLHDPNMVWDFFSLVPESVHQVTFLYTDRGTPDGFRHMNGYGSHTFKFINKDNEAFYVKWHFKTNQGIKNLNRQRAKELESEDPDYAVRDLFNAIAKREFPSWTFCIQVM 273          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.702e-51
Identity = 92/204 (45.10%), Postives = 136/204 (66.67%), Query Frame = 1
Query:   16 FFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQI 615
            FFE    ++  T AD  + PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGN+DLVGNN PVFF++D +KFPD++H++KP P     +    +    DF S  PES+HM  ++  D  +PR +R MEG GV+T+  +N   ++ +VKFHWKP  G++ ++ +EA+K+ GA+     +D++ +I SGN+PEW L++Q+
Sbjct:   97 FFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEPDREFPQAQSAHDNFWDFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVNAKDESTFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDMWQAIQSGNFPEWDLHVQL 300          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.702e-51
Identity = 99/202 (49.01%), Postives = 130/202 (64.36%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQ 612
            F +   + +LT A  L      TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+D+VGNN PVFF++D +KFPD VHA+KP P + + +    +    DF   HPE+ HMF +   D  +PR YR M+G GVNT+ L+NK GK H+VKFHW P  GV  L+ DEA+K+ G +     +DL ++I +  YP+W   IQ
Sbjct:  103 FTLKESIEDLTYAGVLTDTSRNTPVFVRFSTVQGSRGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAIKFPDFVHAVKPEPHNEVPQAQTAHNNFWDFVYLHPEATHMFMWAMSDRAIPRSYRMMQGFGVNTFSLVNKEGKRHFVKFHWIPHLGVHSLVWDEALKLAGQDPDFHRKDLMEAIDNKAYPKWDFAIQ 304          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 7.862e-51
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F    D SN+T A FL A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF++D ++FPD++HA+KP     I +    +    DFFS  P +LH   +     G+PR +RH++G GV+T+ L+ + G    VKFHWK   G+  ++ +EA ++ G N  +  QDL++SI +G YPEW+L +QIM
Sbjct:  104 AGAHGVFTSYGDFSNITAASFLSAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIQFPDLIHAVKPKGDREIPQAATAHDAAWDFFSQQPSTLHTLLWAMAGHGIPRSFRHVDGFGVHTFRLVTEDGSTKLVKFHWKTLQGLASMVWEEAQQISGKNPDYMRQDLFESIEAGRYPEWELNVQIM 313          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.341e-50
Identity = 97/210 (46.19%), Postives = 134/210 (63.81%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F    D SN+T A FL A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGNFD+VGNN PVFF++D ++FPD++H++KP+P + + +    +    DFFS  P +LH   +     G+PR YRHM+G G++T+ L+ + GK+  VK+HWK   G   L+ +EA  + G N     QDL+D+I SGN P W+L +Q++
Sbjct:  106 AGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTKQGKAALVWEEAQVLAGKNADFHRQDLWDAIESGNAPSWELAVQLI 315          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.988e-50
Identity = 98/199 (49.25%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   34 DVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            D +N+T A FL + G +TPV VRFSTV   RGS +T+RD  GFA +FYT EGNFD+VGNN PVFF++D + FPD+VHA+KP+P S I +    +    DFFS  P +LH   +     G+PR YRHM+G GV+T  L+   GK+  VK+HWK   G   L+ +EA  + G N     QDL+D I +GN PEW+L +QI+
Sbjct:  118 DWTNITAASFLNSKGKETPVFVRFSTVAGSRGSADTVRDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLVHAVKPSPDSEIPQAATGHDSAWDFFSQQPSTLHTLFWAMSGHGIPRSYRHMDGFGVHTMRLVTDDGKSKLVKWHWKTKQGKASLVWEEAQILAGKNPDFHRQDLWDDINAGNGPEWELGVQIV 316          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.303e-49
Identity = 92/200 (46.00%), Postives = 136/200 (68.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G +T    RFSTV  ERGS + +RDPRGFA+K+YT EGN+DLVGNN PVFF+RD +KFPD +H  K +P++++  +  + DF+S+ PESL+  +++  D G+P+ +RHM+G G +T+ LIN  G+  +VKFH+    GVK L  +EA +V   +     +DL+++IA G++P+WKL IQ+M
Sbjct:   66 FTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIARGDFPKWKLSIQVM 265          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.303e-49
Identity = 91/200 (45.50%), Postives = 136/200 (68.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G +T    RFSTV  E+GS + +RDPRGFA+K+YT EGN+DLVGNN PVFF+RD +KFPD +H  K +P++++     + DF+S+ PESL+  +++  D G+P+ +RHM+G G +T+ LIN  G+  +VKFH++   GVK L  +EA +V   +     +DL+D+IA G++P+WK+ IQ+M
Sbjct:   66 FTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEVRKYDPDSNQRDLFDAIAGGDFPKWKMSIQVM 265          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.314e-49
Identity = 99/210 (47.14%), Postives = 131/210 (62.38%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F   ++ SN+T A FL A G QTPV VRFSTV   RGS ++ RD  GFA + YT EGNFD+VGNN PVFF++D ++FPD++HA+KP P S I +    +    DFFS  P SLH   +     G+PR  RH++G GV+T+ L+   G +  VKF WK   G   L+ +EA  +GG N     QDL+D+I SG YPEW+L  Q++
Sbjct:  111 AGAHGVFTSYNNWSNITAASFLNAAGKQTPVFVRFSTVAGSRGSVDSARDIHGFATRLYTDEGNFDIVGNNVPVFFIQDAIQFPDLIHAVKPQPDSEIPQAATAHDTAWDFFSQQPSSLHALFWAMSGHGIPRSMRHVDGWGVHTFRLVTDEGNSTLVKFRWKTLQGRAGLVWEEAQALGGKNPDFHRQDLWDAIESGRYPEWELGFQLV 320          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_BORBR9.287e-5247.50Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_TOXGO1.213e-5147.26Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]
CATE_RHIME2.702e-5145.10Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_EMENI2.702e-5149.01Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATB_EMENI7.862e-5146.19Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CAT3_NEUCR1.341e-5046.19Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_ERYGR2.988e-5049.25Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATA_HELPY3.303e-4946.00Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_HELPJ3.303e-4945.50Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATB_AJECA4.314e-4947.14Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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