FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10922 contig Ccv1_Contig10922:306..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.611e-49
Identity = 99/210 (47.14%), Postives = 136/210 (64.76%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFF----SHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ++A  +F+    +S++T ADFL  P   TPV VRFSTV    GS +T+RD RGFA KFYT EG FDLVGNN P+FF++D  KFPD VHA+KP P   I +     D F    S  PE+LH   +   D G+PR YR MEG G++T+ LIN  GKA +V+FHWKP  G   L+ DEA K+ G +     ++L+++I +G++PE++L  Q++
Sbjct:  132 SAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLI 341          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 9.611e-49
Identity = 97/207 (46.86%), Postives = 129/207 (62.32%), Query Frame = 1
Query:    1 ASAKVFFEV-THDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEV + DV     A FL   G +TP+  RFSTV  E+GS ++ RDPRGFAVKFYT EGNFD+VGNN PVFF+RD  KFPD +H  K NP+++ ++     DF    PES H  S LF D G P+ YRHM G   +T   +N  GK ++VK H+    G++    +EA K+   +   AT+DL+++IA G  P WK+ IQ+M
Sbjct:   58 AGAHGYFEVPSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDPRGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQTPESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFVNAQGKPYWVKLHFTSETGIQNYTAEEAAKMSMNDPDSATRDLFETIAKGGEPAWKVSIQLM 264          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 1
Query:   34 DVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            D SN+T A FL A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF++D + FPD++HA+KP   + I +    +    DFFS  P SLH   +     G+PR  RH++G G++T+  +   G +  VKFHWK   G   ++ +EA +V G N     QDL+++I +G YPEW+L +QIM
Sbjct:  116 DYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSSLHTLLWAMSGHGIPRSLRHVDGFGIHTFRFVTDNGDSKLVKFHWKSLQGKASMVWEEAQQVSGKNPDFMRQDLFEAIEAGRYPEWELGVQIM 314          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F    D SN+T A FL   G QTPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF++D + FPD++HA+KP   + I +    +    DFFS  P ++H   +     G+PR +RH++G GV+T+  +   G +  VKFHWK   G   ++ +EA +  G N     QDL+D+I +G YPEW+L +QIM
Sbjct:  106 AGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSTMHTLLWAMSGHGIPRSFRHVDGFGVHTFRFVTDDGASKLVKFHWKSLQGKASMVWEEAQQTSGKNPDFMRQDLHDAIEAGRYPEWELGVQIM 315          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 95/198 (47.98%), Postives = 131/198 (66.16%), Query Frame = 1
Query:   25 VTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            +T D+S  T A  L+ PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN PVFFVRD +KFPD +H  K +P++H++    + DF+S  PESLH  + L  D G+P D RH+ G G +TY   N AG+ ++VKFH+K   G K     EA +V G       +DL+ +I +G +P+WK+ +QIM
Sbjct:   67 ITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTILMSDRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHFKTMQGHKHWTNAEAEQVIGRTRESTQEDLFSAIENGEFPKWKVQVQIM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 95/198 (47.98%), Postives = 131/198 (66.16%), Query Frame = 1
Query:   25 VTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            +T D+S  T A  L+ PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN PVFFVRD +KFPD +H  K +P++H++    + DF+S  PESLH  + L  D G+P D RH+ G G +TY   N AG+ ++VKFH+K   G K     EA +V G       +DL+ +I +G +P+WK+ +QIM
Sbjct:   67 ITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTILMSDRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHFKTMQGHKHWTNAEAEQVIGRTRESTQEDLFSAIENGEFPKWKVQVQIM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 95/198 (47.98%), Postives = 131/198 (66.16%), Query Frame = 1
Query:   25 VTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            +T D+S  T A  L+ PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN PVFFVRD +KFPD +H  K +P++H++    + DF+S  PESLH  + L  D G+P D RH+ G G +TY   N AG+ ++VKFH+K   G K     EA +V G       +DL+ +I +G +P+WK+ +QIM
Sbjct:   67 ITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTILMSDRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHFKTMQGHKHWTNAEAEQVIGRTRESTQEDLFSAIENGEFPKWKVQVQIM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 92/201 (45.77%), Postives = 128/201 (63.68%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDV-GVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            FE T D++  T        G +TP++ RFSTV  ERG+P+T RDPRGFA+KFYT EG FD+VGNN PVFF+RD  KFP  +H  K NP++ +++     D+ S + ES+H    LF D+ G P  YR M+G   +TY  +N  G+ +Y K+H+    G K L  +EA  + G+N  HA QDL+++I  G+YP W LY+Q+M
Sbjct:   70 FECTDDITKYTKHTMFSKVGKKTPMVARFSTVGGERGTPDTARDPRGFALKFYTDEGIFDMVGNNTPVFFLRDPAKFPLFIHTQKRNPQNDMKDATMFWDYLSQNAESIHQVMILFSDLGGTPYSYRFMDGFSSHTYKFVNDKGEFYYCKWHFITNQGTKGLTNEEAAALDGSNPDHARQDLFEAIERGDYPSWTLYVQVM 270          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 94/206 (45.63%), Postives = 132/206 (64.08%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F +T DVS  T A FL   G +T   +RFSTV    G+ + +RDPRG+A+KFYT EGN+DLVGNN PVFF++D +KFPD +H  K +P +  QE   + DF+   PES H  ++LF D G+P  YRHM G G +TY   N+AG+  +VK+H+K   G+K L +DEA ++ G +     +DL ++I  G++P W + +QIM
Sbjct:   58 AGAYGTFTLTRDVSRWTRAAFLSEVGKRTETFLRFSTVAGSLGAADAVRDPRGWALKFYTEEGNYDLVGNNTPVFFIKDAIKFPDFIHTQKRDPYTGSQEADNVWDFWGLSPESTHQVTWLFGDRGIPASYRHMNGYGSHTYQWNNEAGEVFWVKYHFKTDQGIKNLTQDEANRLAGEDPDSHQRDLREAIERGDFPTWTVQVQIM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.796e-48
Identity = 90/200 (45.00%), Postives = 133/200 (66.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD++  T A      G +T + +RFSTV  ERG+ +  RD RGF+++FYT +GN+DLVGNN PVF++RD +KFPD+ H +K +P+++++      DFFSH PESLH  +  F D G+P+ YRH+ G G +T+  IN   +  +VKFH+K   G++ L   EA +V   +   + +DLY+SI  G++P WK+Y+QIM
Sbjct:   65 FTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENLTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIM 264          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATE_ECOLI9.611e-4947.14Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_DICDI9.611e-4946.86Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATB_ASPOR1.255e-4846.73Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATB_ASPFU1.255e-4845.24Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATA_BRUSU1.255e-4847.98Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATA_BRUME1.255e-4847.98Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB1.255e-4847.98Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]
CATA_SCHPO2.141e-4845.77Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
BCA_STRVL2.141e-4845.63Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATA_PSEAE2.796e-4845.00Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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