FC868877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CLOAB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium acetobutylicum GN=dxr PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23 Identity = 56/134 (41.79%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 K IS+LG+TGSIGTQTLD++ + F+++A++A SN + + + FKP++V + ++ +++ + + K + G + E A + D+ VVT IVG GL PT+ AI+AGKDIALANKETL+ G V Sbjct: 2 KNISILGATGSIGTQTLDVIRNDSEAFKLLAVSAHSNFKKMIEIIDEFKPELVVMVDKLAYNKVLDYCCEKKLKTSVKVGYEAFNEVASYKDSNIVVTSIVGMIGLIPTLEAIKAGKDIALANKETLVVAGELV 135
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CLOBM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=dxr PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 54/138 (39.13%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I++LG+TGSIGTQTLD++ + ++ ++VA++A + + + +K FKP+ + E+ +++ + + ++L G +G+I + + TVVT +VG GL PT+ AIE+GKDIALANKETL+ G V+ A Sbjct: 2 KNITILGATGSIGTQTLDVIRKGNEELKLVAISANKSYKKVIEIIKEFKPKYAVLMEENAFKIVEDFCVDSKIDTKVLKGMEGMIYISTLEEINTVVTSVVGMIGLVPTIKAIESGKDIALANKETLVVAGELVISKA 139
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACLD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dxr PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 61/134 (45.52%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 K I +LG+TGSIG QTLD++ H+DKFR+ A+ G N A+ ++ FKP+ V V +E + +K+ + K I GE+ +IEAA P+A VV +VG GL PT+ A+E K IALANKETL+ G V Sbjct: 2 KNICLLGATGSIGEQTLDVIKAHDDKFRLTAMTFGKNAEKAAEIIETFKPKYVGVGDEHTYETLKQHSFSYTFKTGI--GEEALIEAAVIPEADIVVNALVGSVGLLPTLKAMEHKKTIALANKETLVTAGHIV 133
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_METCA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Methylococcus capsulatus GN=dxr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL-ANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 K I +LGSTGSIG TLD++A H D++RVVAL+A N+ L +Q + +P+ AV ++E L A E+LAG + + + A P+ +V+ IVG AGL PT+AA AGKD+ LANKE L+ GP + Sbjct: 2 KGICILGSTGSIGVSTLDVLARHPDRYRVVALSANGNVDRLFEQCRAHRPRYAAVIRAEAAACLRERLMAAGLGGIEVLAGPEALEQIASLPEVDSVMAAIVGAAGLLPTLAAARAGKDVLLANKEALVMSGPLFM 137
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CLOCE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dxr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 K IS++GSTGSIG QTL+ A +V AL+A SNI LL QV FKP VV+V N L E+ L E+L G+ G+ H +A TVVT +VG AGL PT+ AI K+IALANKETL+ G V+ Sbjct: 3 KIISIIGSTGSIGRQTLE--AAKNLGIKVAALSANSNIDLLEKQVHEFKPDVVSVGNSELAKEMSNRLQGFGI--EVLWGQDGMKRVVEHSEADTVVTSVVGTAGLIPTIHAIRHKKNIALANKETLVTAGQLVM 133
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CLOBH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 54/138 (39.13%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I++LG+TGSIGTQTLD++ +++ ++VA++A + + + +K FKP+ + E+ +++ + + ++L G +G+I + + TVVT +VG GL PT+ AIE+GKDIALANKETL+ G V+ A Sbjct: 2 KNITILGATGSIGTQTLDVIRREKEELKLVAISANKSDKKVIEIIKEFKPKYAVLMEENAFKIVEDFCIDNKIDTKVLKGMEGMIYISTLEEVNTVVTSVVGMIGLVPTIKAIESGKDIALANKETLVVAGELVISKA 139
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CLOB1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 54/138 (39.13%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I++LG+TGSIGTQTLD++ +++ ++VA++A + + + +K FKP+ + E+ +++ + + ++L G +G+I + + TVVT +VG GL PT+ AIE+GKDIALANKETL+ G V+ A Sbjct: 2 KNITILGATGSIGTQTLDVIRREKEELKLVAISANKSDKKVIEIIKEFKPKYAVLMEENAFKIVEDFCIDNKIDTKVLKGMEGMIYISTLEEVNTVVTSVVGMIGLVPTIKAIESGKDIALANKETLVVAGELVISKA 139
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_ACIBC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acinetobacter baumannii (strain ACICU) GN=dxr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 58/138 (42.03%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA--NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 + +LG TGSIG TL I+ +H DK+ V A++A S I+ L + K+F+P+VV V + ++ E+K A N+ + ++LAG++G+++ A H D V+ IVG AGL PT+AA++AGK + LANKE L+ G ++ A Sbjct: 5 VCILGVTGSIGRSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQKIV-ELKTLFAQQNISDI-DVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGEIMMQAA 140
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_NITMU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dxr PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 +++LGSTGSIG TLD+VA H D+FRVVAL A ++ + +Q +RF+P+ + +E+ + ++ + E+L G + + A PD TV+ IVG AG++PT AA GK + LANKET++ G Sbjct: 7 LTILGSTGSIGVSTLDVVARHPDRFRVVALTANKSVQKILEQCRRFEPRYAVLLDEASAELLQVEIRRAGLATEVLWGVDSLEKVASLPDVDTVMAAIVGAAGIRPTFAAAATGKRVLLANKETMVMAG 135
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_ACIBY (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acinetobacter baumannii (strain AYE) GN=dxr PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23 Identity = 58/138 (42.03%), Postives = 90/138 (65.22%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA--NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 + +LG TGSIG TL I+ +H DK+ V A++A S I+ L + K+F+P+VV V + + E+K A N+ + ++LAG++G+++ A H D V+ IVG AGL PT+AA++AGK + LANKE L+ G ++ A Sbjct: 5 VCILGVTGSIGRSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQKIA-ELKTLFAQQNISDI-DVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGEIMMQAA 140 The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bpback to top |