FC868877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.071e-36 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE------EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 K ISVLGSTGSIGTQTL IV + D+FRVVAL AG N+ LL +Q++R +P++VA+ +E+LL E+K+ L ++ + PE++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP Sbjct: 2 KAISVLGSTGSIGTQTLQIVDDFPDQFRVVALTAGRNLALLVEQIQRHQPELVALADEALLPELKQRLEALDPSDRPAQCPEMVGGPDGLEVAASWGSAELVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLP 143
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.870e-36 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV----EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 K ISVLGSTGSIGTQTL I E ++FRVVAL AG N+ LL +QV+R +P+VVA+ + LL E++E L + + P+++ G G+ AA A VVTGIVGCAGL PT+AAI AGKD+ALANKETLIA GP VLP Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFRVVALTAGRNLKLLVEQVQRHRPEVVALADSDLLPELQERLKDAGVTGADAPQLVGGADGLNVAAAWDSADLVVTGIVGCAGLLPTLAAIRAGKDLALANKETLIAAGPVVLP 141
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 80/142 (56.34%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 K ISVLGSTGSIGTQTL I E D+F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPDQFKIVALTAGKNLDLVTKQIETHQPEVVSLADESLLPELTRRINSLNEDSKILKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIP 143
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 81/142 (57.04%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL------ANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 K ISVLGSTGSIGTQTL IV + D+FRVVAL+AG N++LL Q++R +P VVA+ +++LL E+K+ L E P ++ G +G+ A A VVTGIVGCAGL PT+AAI AGKD+A+ANKETLIA GP VLP Sbjct: 2 KAISVLGSTGSIGTQTLAIVEDFPDQFRVVALSAGRNLSLLVSQIQRHRPDVVALADQALLAELKDRLMALPADTRPEPLPHLVGGPEGLDVVASWDSADLVVTGIVGCAGLLPTLAAIRAGKDLAVANKETLIAAGPVVLP 143
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35 Identity = 79/142 (55.63%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 K ISVLGSTGSIGTQTL I E ++F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFKIVALTAGKNLDLVIKQIETHQPEVVSLADESLLSELSSRINSLTENKKIVKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIP 143
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PROMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxr PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35 Identity = 76/134 (56.72%), Postives = 101/134 (75.37%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 +LGSTGSIGTQTL+IV+E DKF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+AGK+IALANKETLIA G V+P Sbjct: 1 MLGSTGSIGTQTLEIVSELPDKFKVVALSAGRNIDLLTEQVSQHKPEVIAIEDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKAGKNIALANKETLIAAGSVVIP 134
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PROM5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxr PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34 Identity = 77/138 (55.80%), Postives = 102/138 (73.91%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 K I+VLGSTGSIGTQTL+IV E +KF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+A K+IALANKETLIA G V+P Sbjct: 2 KYITVLGSTGSIGTQTLEIVRELPNKFKVVALSAGRNIDLLTEQVSQHKPEVIAIDDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKASKNIALANKETLIAAGSVVIP 139
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 77/138 (55.80%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 +LGSTGSIGTQTL+I E ++FRVVAL AG+N++L+ +Q++R P+VVA+ + SLL E+K+ L + + P++LAG +G+ AA A VV+GIVGCAGL PT+AAI+AGKD+ALANKETLIA P VLP Sbjct: 1 MLGSTGSIGTQTLEIAEEFPERFRVVALTAGTNVSLVVEQIQRHHPEVVALADASLLPELKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWDSADLVVSGIVGCAGLLPTLAAIKAGKDLALANKETLIAAAPVVLP 138
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 76/135 (56.30%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE---ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP 678 +LGSTGSIGTQTL I E ++FRVVAL AG N+ LL Q++R +P++VA+ N LL E+++ AL ++P+++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP Sbjct: 1 MLGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELVALANADLLPELQQRLDALGTDRKRPQLVGGPDGLNIAASWESADLVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLP 135
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_GEOUR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter uraniireducens (strain Rf4) GN=dxr PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33 Identity = 76/137 (55.47%), Postives = 97/137 (70.80%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL 681 K +++LGSTGSIG TLDIVA H DKF+VVAL AG N+ LL Q++ F PQ+VAV NE L ++++ L+ + P IL G +G+I AA DA VV IVG AGL PT AAI+AGKDIALANKETL+ G ++ + Sbjct: 2 KKLAILGSTGSIGVSTLDIVAAHPDKFQVVALTAGGNLDLLKKQIEEFSPQLVAVLNEELAQKLQQMLSG--KGPAILHGVEGMIAAATAADADMVVAAIVGAAGLVPTAAAIKAGKDIALANKETLVTAGRLIMDM 136 The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bpback to top |