FC868877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PARDP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Paracoccus denitrificans (strain Pd 1222) GN=dxr PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIV--AEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 + ISVLG+TGS+G D++ A ++FR VAL G+N+ LA + + ++ L +++ ALA E AG Q V EAA P A ++ IVG AGL P + + G +ALANKETL+A GP V+ A Sbjct: 2 RSISVLGATGSVGESAFDLLMGAGGPERFRTVALTGGANVARLAQMARALRAELAVTAWPERLADLRAALAG--SGIEAAAGPQAVAEAAARP-ADWTLSAIVGAAGLPPGLEVLNRGGTLALANKETLVAAGPLVMARA 138
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_MYCTU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium tuberculosis GN=dxr PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 262 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 DG + VLGSTGSIGTQ L ++A++ D+F VV LAAG D + R + Q V N ++ DE A V + P G +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL A Sbjct: 10 DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG---AHLDTLLRQRAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA 142
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_MYCTA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=dxr PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 262 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 DG + VLGSTGSIGTQ L ++A++ D+F VV LAAG D + R + Q V N ++ DE A V + P G +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL A Sbjct: 10 DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG---AHLDTLLRQRAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA 142
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_MYCBT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=dxr PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 262 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 DG + VLGSTGSIGTQ L ++A++ D+F VV LAAG D + R + Q V N ++ DE A V + P G +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL A Sbjct: 10 DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG---AHLDTLLRQRAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA 142
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_MYCBP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=dxr PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 262 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 DG + VLGSTGSIGTQ L ++A++ D+F VV LAAG D + R + Q V N ++ DE A V + P G +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL A Sbjct: 10 DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG---AHLDTLLRQRAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA 142
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_MYCBO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium bovis GN=dxr PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 262 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 DG + VLGSTGSIGTQ L ++A++ D+F VV LAAG D + R + Q V N ++ DE A V + P G +A V+ +VG GL+PT+AA++ G +ALANKE+L+AGG VL A Sbjct: 10 DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG---AHLDTLLRQRAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA 142
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_LEIXX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Leifsonia xyli subsp. xyli GN=dxr PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 56/132 (42.42%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 + +LGSTGSIG Q L++VA + D+F+VV L AGS+ LA+Q +RF VR +L E L R DA V+ GI G GL PT+AA+E+G+ +ALANKE+LI GG V Sbjct: 6 VVILGSTGSIGMQALEVVAANPDRFQVVGLTAGSSAGQLAEQAERF-----GVRETALGAGDSERL-------------------VRSVDADVVLNGITGSVGLGPTLAALESGRTLALANKESLIVGGELV 113
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XYLFT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dxr PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 ++VLG+TGSIG LD++A H +F V LAAG + L + ++P + + +L +++ L + AGE + E TVV IVG AGL T+AA AGK + LANKE+L+ G ++ Sbjct: 8 VAVLGATGSIGAAALDVLARHPRQFHVSLLAAGQRVDALLALCRTYRPDHAVIGDATLYTTLRDGLNAAGLATKAYAGEAALAELVASTTCDTVVAAIVGAAGLHSTLAAARAGKRLLLANKESLVLAGMLLM 140
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XYLF2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xylella fastidiosa (strain M23) GN=dxr PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 ++VLG+TGSIG LD++A H +F V LAAG + L + ++P + + +L +++ L + AGE + E TVV IVG AGL T+AA AGK + LANKE+L+ G ++ Sbjct: 8 VAVLGATGSIGAAALDVLARHPRQFHVSLLAAGQRVDALLALCRTYRPDHAVIGDATLYTTLRDGLNAAGLATKAYAGEAALAELVASTTCDTVVAAIVGAAGLHSTLAAARAGKRLLLANKESLVLAGMLLM 140
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_AGRVS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxr PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 53/134 (39.55%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 268 PKPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 P+ +++LGSTGSIGT TLD++ + D+F ++AL N+ LLA+Q ++ +E+ +K+ L+ ++ AG G+ EAA +A V+ IVG AGL+PT+ A G DIALANKE L++ G Sbjct: 8 PRRLTILGSTGSIGTNTLDVIRQMGGRDRFDIMALTGHGNVALLAEQALVTGARLAVTSDENQYIALKDLLSG--SGIDVAAGSSGLQEAACL-EADWVMAAIVGTAGLQPTLTAAARGADIALANKECLVSAG 138 The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bpback to top |