FC868877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CHLFF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlamydophila felis (strain Fe/C-56) GN=dxr PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17 Identity = 57/141 (40.43%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA--GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K +S+ GSTGSIG QTL IV F VVALA+ G+N L +Q++ F P +V+V +E L EI+ +E PEI A E+G++ AA + VV G L + A+++GK +ALANKE L++ G + A Sbjct: 2 KHLSIFGSTGSIGQQTLKIVRSLPHLFNVVALASYGNNKDLFIEQIREFSPSIVSVYDEQLYFEIR------KEFPEIQAFLREEGLMAAATAEEIDMVVAASSGVVALPAIIEAMKSGKVLALANKEVLVSAGEIIKEFA 136
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XYLFM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xylella fastidiosa (strain M12) GN=dxr PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16 Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 ++VLG+TGSIG LD++A H +F V LAAG + L ++P + + +L +++ L + AGE + E TVV IVG AGL T+AA AGK + LANKE+L+ G ++ Sbjct: 8 VAVLGATGSIGAAALDVLARHPRQFHVSLLAAGQRVDALLALCHTYRPDHAVIGDATLYTTLRDGLNAAGLATKAYAGEAALAELVASTTCDTVVAAIVGAAGLHSTLAAARAGKRLLLANKESLVLAGMLLM 140
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XYLFA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xylella fastidiosa GN=dxr PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16 Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 ++VLG+TGSIG LD++A H +F V LAAG + L ++P + + +L +++ L + AGE + E TVV IVG AGL T+AA AGK + LANKE+L+ G ++ Sbjct: 8 VAVLGATGSIGAAALDVLARHPRQFHVSLLAAGQRVDALLALCHTYRPDHAVIGDATLYTTLRDGLNAAGLATKAYAGEAALAELVASTTCDTVVAAIVGAAGLHSTLAAARAGKRLLLANKESLVLAGMLLM 140
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_EHRCR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ehrlichia chaffeensis (strain Arkansas) GN=dxr PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16 Identity = 55/139 (39.57%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGGPFVLPLA 684 K +S+ GSTG+IG +DI+ DK++V L A SN+ LLA Q K + V + N L E+K+ L K + AG+ G++ A D + IVG A L P I +G K IALANKE+++ GG +L LA Sbjct: 2 KTVSIFGSTGAIGQMIIDIIFADLDKYQVKVLVAKSNVQLLAFQAKLINAERVVIANVDLYQELKDLLVGTNIK--VSAGDSGMV-MATSLDVDYAMMAIVGMAALIPMTYLINSGIKVIALANKESIVCGGTLLLSLA 137
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_DEIRA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Deinococcus radiodurans GN=dxr PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 60/146 (41.10%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI-----------AGGPFVLPL 681 ++VLGSTGSIGTQTLD+ + + V LAAG N+ LLA+QV+ F+P +V+V + S+L E +E L+ V ++A A A VV + G GL PT AA+EAG+ +ALA KE ++ AGG V+P+ Sbjct: 6 LTVLGSTGSIGTQTLDVARQRG--YTVGTLAAGRNLDLLAEQVREFRPALVSV-DGSILAEARERLSGVR----VIADPSEAAVA----QADVVVNAMSGLIGLPPTRAALEAGQAVALATKEAMVTSAHLMWEAAAAGGGRVVPV 140
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_ARTAT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Arthrobacter aurescens (strain TC1) GN=dxr PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1 Query: 268 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVR--NESLLDEIKEALANVEE----KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 P+ I +LGSTGSIGTQ +D+V +F VVAL+AG N+ L+A Q + Q V + ++ L ++ A A PEI G A + V+ GI G GL PT+AA+ G +ALANKE+LI GG V Sbjct: 3 PRKIVILGSTGSIGTQAIDVVDAAPHRFEVVALSAGGGNLALIAQQAVHTRAQAVGIAQGDQGALRQLIAAAAAAAGVRNFAPEIFVGPDASTRIAAI-ECDVVLNGITGSIGLAPTLAALGTGATLALANKESLIVGGALV 143
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XANCB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas campestris pv. campestris (strain B100) GN=dxr PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 ++V G+TGSIG LD++A H ++ R L+AGS + L + +P + + +L +++ L + + AG+Q + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 9 VAVFGATGSIGASALDVIARHPERLRASVLSAGSKVDALLALCVQHRPAHAVIADAALYPTLRDGLHDAGLTTQAHAGDQALDALAASDACDTVVAAIVGAAGLSSTLAAAAAGKRLLLANKESLVLAG 137
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_SHEWM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dxr PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 +LG+TGSIG TL ++A + + + V AL A +N+ + ++++P+V + +E ++E L+ K E+ GE + TV+ IVG AGL PT+AA++AGK + LANKE+L+ G Sbjct: 6 ILGATGSIGASTLSVIASNPETYSVYALVANTNVDKMMALCEQYRPKVAHMVDEQAAKSLQERLSP-SLKIEVTTGESQLESIVTSSCVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKESLVMSG 131
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XANAC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas axonopodis pv. citri GN=dxr PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 268 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 P+ ++V G+TGSIGT LD++A H ++ R L+AGS + L +P + + +L +++ L + AG + + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 6 PRQVAVFGATGSIGTSALDVIARHPERLRASVLSAGSKVDELLALCATHRPAHALIADATLYPALRDGLRARGLATQAHAGAEALDALASSDACDTVVAAIVGAAGLPSTLAAARAGKRLLLANKESLVLAG 137
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_SHEPW (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dxr PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 +LG+TGSIG TL++V + +++RV AL A +N+ + + +P V + N E+K L + E E+ GE ++ + TV+ IVG AGL T+AA++AGK + LANKE+L+ G Sbjct: 6 ILGATGSIGASTLNVVKCNHEQYRVFALVANTNVAKMLEICIEHRPLVAHMVNAQAATELKRLLPS-ELAIEVTTGEDELLSLVSCAEVDTVMAAIVGAAGLPSTLAAVKAGKRVLLANKESLVMSG 131 The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bpback to top |