FC868877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CAMJD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dxr PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15 Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 + GSTGSIG L + A + ALA G NI LL +Q+ RFKPQ VA+++ +K + G++G+ + ++ IVG AGLK T+ A E GK+IALANKE+L+ G F+ Sbjct: 3 LFGSTGSIGVNALKLAALKN--IPISALACGDNIALLNEQIARFKPQFVAIKDSKNKHLVKH--------DRVFIGQEGLEQILTECQDRLLLNAIVGFAGLKSTLKAKELGKNIALANKESLVVAGSFL 122
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CAMHC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dxr PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15 Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 VLGSTGSIGT +L+I + V ALA N+ L Q+ F P+ V +++E L ++ +I +GE G+ E ++ TV+ +VG AGL P++ +GK + L+NKE+L+ GG F+ Sbjct: 3 VLGSTGSIGTNSLEIARKFN--IEVEALACAENVKKLNAQIAEFHPKFVYIKDEKLKSKVAHN--------KIFSGENGICEMLNRCESKTVINALVGFAGLIPSLKIQNSGKILCLSNKESLVVGGKFL 122
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_ANAPZ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaplasma phagocytophilum (strain HZ) GN=dxr PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15 Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGG 663 K +SV GSTG IG T+ I++ + + F+V+AL AGSN++LLA Q K ++ + +++ +E+K +L + AG++ V+EAA T V I G L + IE+G IALA+KE+++ GG Sbjct: 2 KKVSVFGSTGFIGKTTVGILSGNTEDFKVIALVAGSNVSLLAQQAKLLNAEMAVIADDAQYEELKRSLHG--SGIRVAAGKEAVLEAAA-LSVDTAVMAITGIVALSAVMRLIESGVGTIALASKESVVCGG 130
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XANOP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=dxr PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 + ++V G+TGSIG LD++A H ++ R L+AGS + L +P + + +L +++ L + + AG + + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 7 RQVAVFGATGSIGASALDVIARHPERLRASVLSAGSKVEDLLALCAAHRPAHAVIADAALYPALRDGLRALGLATQAHAGAEALDALAGSDACDTVVAAIVGAAGLPSTLAAARAGKRLLLANKESLVLAG 137
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PSYA2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=dxr PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 I+VLG+TGSIG TL I+A + V AL+ + L ++F P+ V V ++ D+ + L+ E++ G+ G+++ A TVV IVG AGL T+AA AGK I LANKE L+ G ++ Sbjct: 7 IAVLGATGSIGDSTLAILAAQPQYYDVYALSGYHRLDKLLALCQQFAPKRVGVPTTAV-DDFAKRLSAAGLDIEVVGGDAGLVDIATDSQTDTVVAAIVGAAGLPSTLAAARAGKRILLANKEALVMAGQVMI 138
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XANC5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dxr PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 + ++V G+TGSIG LD++A H ++ R L+AGS + L +P + + +L +++ L + + AG + + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 7 RQVAVFGATGSIGASALDVIARHPERLRASLLSAGSKVDELLALCATHRPAHAVIADAALYPALRDGLRALGLATQAHAGAEALDALASGDVCDTVVAAIVGAAGLPSTLAAARAGKRLLLANKESLVLAG 137
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_THET8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dxr PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 K + VLGSTGSIG Q L++ + VV LAAG N+ L+ Q+ +KP++VA ESL E+K + A E +EA V I G AGL PT AA+ GK +ALANKE ++A GP + Sbjct: 2 KRVVVLGSTGSIGQQALEVCRLRG--YEVVGLAAGKNLEALSRQIALWKPRLVAAE-ESLHKELKARFPGLRLAT---AEEVAALEAE------VAVAAIPGLAGLAPTRAAVRTGKRVALANKEAMVAAGPLL 123
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_THET2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dxr PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 K + VLGSTGSIG Q L++ + VV LAAG N+ L+ Q+ +KP++VA ESL E+K + A E +EA V I G AGL PT AA+ GK +ALANKE ++A GP + Sbjct: 2 KRVVVLGSTGSIGQQALEVCRLRG--YEVVGLAAGKNLEALSRQIALWKPRLVAAE-ESLHKELKARFPGLRLAT---AEEVAALEAE------VAVAAIPGLAGLAPTRAAVRTGKRVALANKEAMVAAGPLL 123
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CAMJR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter jejuni (strain RM1221) GN=dxr PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 + GSTGSIG L + A + ALA G NI LL +Q+ RFKP+ VA+++ +K + G++G+ + ++ IVG AGLK T+ A E GK+IALANKE+L+ G F+ Sbjct: 3 LFGSTGSIGVNALKLAALKN--IPISALACGDNIALLNEQIARFKPKFVAIKDSKNKHLVKH--------DRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKELGKNIALANKESLVVAGSFL 122
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_XANOR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas oryzae pv. oryzae GN=dxr PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 + ++V G+TGSIG LD++A H ++ R L+AGS + L +P + + +L +++ L + + AG + + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 7 RQVAVFGATGSIGASALDVIARHPERLRASVLSAGSKVEDLLALCAAHQPAHALIADAALYPALRDGLRALGLATQAHAGAEALDALAGSDACDTVVAAIVGAAGLPSTLAAARAGKRLLLANKESLVLAG 137 The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bpback to top |