FC868877

Overview
NameFC868877
Unique NameFC868877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_ANAD2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=dxr PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K +++LGSTGSIG Q LD+V    D+F VV LAAG N   L +Q++RF+P+VV+V +E+    ++   A      E+L+G+ G +  A HPDA  V+  I G AGL+ T AAIEAGK + LANKE+++  G  ++  A
Sbjct:    2 KRVAILGSTGSIGVQALDVVGRFPDRFEVVGLAAGRNAPRLLEQIRRFRPRVVSVCDEAAARAVR---AEAPPGTEVLSGDAGAVAVASHPDAAFVLAAISGGAGLRSTAAAIEAGKPVGLANKESMVLAGELLMARA 136          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PHOLL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Photorhabdus luminescens subsp. laumondii GN=dxr PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675
            K +++LGSTGS+G  TL +V  + DKF+V ALAAG NI ++A+Q   F+PQ  A+ +E    E+++ L     K E+  GEQ   + A   D   V++GIVG AGL PT+AAI AGK I LANKE+LI  G F +
Sbjct:    2 KRLTILGSTGSVGKSTLTVVRNNPDKFKVTALAAGKNIQVMAEQCLEFRPQYAAMADEVSAKELRQLLIEQGCKTEVFFGEQAACDLAALNDVDQVMSGIVGVAGLLPTLAAIRAGKQILLANKESLITSGRFFM 136          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PELTS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dxr PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 64/138 (46.38%), Postives = 91/138 (65.94%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K I ++GSTGSIG QTL+++    D+F+VV L +G N  L+A+Q++ F+P  VA+  E  +  +KE LA     PE+  G  G+   A  P+A  VV  + G AG+ PT+AAI+AGKD+ALANKETL+A G  V+ +A
Sbjct:    2 KNIVLIGSTGSIGRQTLEVIGSLPDRFKVVGLGSGKNWRLMAEQIRVFRPSAVAMAGEREIMNLKELLAG-SYCPELGWGRTGMESLASMPEADLVVVAVTGFAGIYPTIAAIQAGKDVALANKETLVAAGHLVMKMA 138          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PELPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dxr PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL 681
            + +++LGSTGSIG  TLD+V +H +KF++  LA G ++ LLA+Q+K F P  V+VR+   + +++  L +   KPEI  G +G    A       VV+ IVG AGL PTV+AI+AGK IALANKETL+  G  V  L
Sbjct:    2 RSLAILGSTGSIGLSTLDVVRQHPEKFKIAGLAEGHDVALLAEQIKEFLPAAVSVRDADSVKKLQTLLGS--HKPEIFHGLEGAAAIASAEGVDMVVSAIVGAAGLLPTVSAIKAGKHIALANKETLVVAGKLVSDL 136          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACC7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain AH187) GN=dxr PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAA 135          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACC3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain 03BB102) GN=dxr PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAA 135          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACC1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain ATCC 10987) GN=dxr PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAA 135          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR2_BACHK (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus thuringiensis subsp. konkukian GN=dxr2 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGNEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAA 135          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR2_BACCZ (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus cereus (strain ZK / E33L) GN=dxr2 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAA 135          
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR2_BACAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus anthracis GN=dxr2 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAA 135          
The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 429
Match NameE-valueIdentityDescription
DXR_ANAD23.915e-2744.931-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PHOLL5.113e-2747.411-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PELTS5.113e-2746.381-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PELPB5.113e-2746.721-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC75.113e-2747.101-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC35.113e-2747.101-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC15.113e-2747.101-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR2_BACHK5.113e-2747.101-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR2_BACCZ5.113e-2747.101-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR2_BACAN5.113e-2747.101-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31005H08EF AbioticL1 Citrus clementina cDNA clone C31005H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bp
GAGATAAAAAGAGGAGAAAAAAAACAGGTTGTTAAAGCTTTGATGGCATT
GAATTTGCAGTCCCCAGCTGAAATCAAGGCTCTCTCTTTCTTGGAGACAA
CCAGGTCAAATCATCGCCTCCCCAAGCTCTCAGGTGGGTTTCCTTTGAAG
AGGAAGGATAATGCAACGGCGACGTTTGGTAGAATAGTTCAATGTTCTGC
TCAGGGACCTCCTCCTGCATGGCCAGGCCGAGCTGTTACAGAGACTTTTC
GTAAGACTTGGGATGGTCCAAAGCCAATCTCAGTGCTTGGGTCAACTGGT
TCTATTGGAACTCAGACGTTGGACATAGTTGCGGAGCATGAAGATAAATT
CAGAGTTGTGGCACTGGCAGCTGGTTCAAATATAACTCTTCTTGCTGATC
AGGTGAAGAGATTCAAACCTCAAGTAGTTGCTGTTAGAAATGAGTCATTA
CTTGATGAAATCAAGGAGGCTTTGGCTAATGTTGAAGAAAAGCCCGAGAT
TTTGGCCGGGGAACAGGGAGTCATTGAGGCTGCCCGACACCCAGATGCGG
TCACCGTGGTGACAGGTATAGTCGGTTGTGCAGGATTAAAGCCTACAGTT
GCTGCGATAGAAGCAGGAAAAGATATAGCTTTGGCCAATAAGGAGACATT
GATTGCTGGTGGTCCTTTTGTCCTTCCTCTAGCTCACAAGCATAAACATA
AAATTTCTTCCAGCTGAT
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