FC868877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_PORG3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dxr PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I++LGSTGSIGTQTLDI+ + D F V L A +N+ LL Q + ++P++V + N+ I+EALA++ K + G + + +A PD VVT +VG +GL PT+ AIEA K IALANKETL+ G ++ LA Sbjct: 3 KNIAILGSTGSIGTQTLDIIHLNPDLFDVYLLTANNNVDLLIRQAREYRPEIVVIANDQKYHLIQEALADLPIK--VWCGAEAIADAVTAPDIDMVVTAMVGYSGLLPTIKAIEARKMIALANKETLVVAGELIMRLA 138
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_THETN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter tengcongensis GN=dxr PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 62/137 (45.26%), Postives = 95/137 (69.34%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL 681 K + +LGSTGSIG QTLD+V +++F +V L +N++LL+ Q+K F+P+VVAV++E +++E N++E E+L G++G+ E ++ +A VV + G AGL PTV AI+ GK+IALANKE L+ G V+ L Sbjct: 2 KKLIILGSTGSIGRQTLDVVRSLKEEFEIVGLTGYNNVSLLSKQIKEFRPKVVAVKDEEKARKLRE---NLDEPIEVLTGKEGLKEIVKY-EADMVVVAVEGIAGLIPTVEAIKLGKNIALANKEVLVTAGEIVMGL 134
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_STRAW (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Streptomyces avermitilis GN=dxr PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 69/139 (49.64%), Postives = 88/139 (63.31%), Query Frame = 1 Query: 283 VLGSTGSIGTQTLDIVAEHEDKFRVVAL-AAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV----EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 +LGSTGSIGTQ +D+V + D+FRV L AAG + LLA+Q R + VAV E ++ ++EAL E PEILAG + A D TV+ GI G GL PT+AA+EAG+ +ALANKE+LI GGP V LA Sbjct: 2 ILGSTGSIGTQAIDLVLRNPDRFRVTGLSAAGGRVGLLAEQAHRLRVSTVAVAREDVVPVLREALTAQYGPGEPLPEILAGADAATQLAAS-DCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGGPLVKALA 139
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACSK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus clausii (strain KSM-K16) GN=dxr PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 61/138 (44.20%), Postives = 94/138 (68.12%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K IS+LGSTGSIGTQTLD++ ++ D+F + ALA G+N+ L +Q+K F+P++V+V+ ++ + + E L GE+G+ E AR+ ++ VVT I G GL PT++AI+A K +A+ANKETL++ G V+ A Sbjct: 2 KQISLLGSTGSIGTQTLDVIRDYPDQFTLSALACGTNLELCRNQIKEFQPKLVSVQRP---EDAQTLAGEFGDSIEFLYGEEGLKEVARYSESDIVVTAITGSIGLLPTLSAIKAKKAVAIANKETLVSAGHLVVSAA 136
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_HAEDU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Haemophilus ducreyi GN=dxr PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 663 K I +LG+TGSIG TL ++ + D+++V AL G N+ L+A Q +FKP+ A+ +E + E L + ++L GEQ + E A HPDA V+ IVG AGL PT+AA++AGK I LANKE+L+ G Sbjct: 2 KNIVILGATGSIGQSTLSVIEHNPDQYQVFALVGGKNVELMATQCSQFKPKFAALVDEKAAKLLAEQLKALNLTTQVLTGEQAICELAAHPDANIVMAAIVGAAGLLPTLAAVKAGKQILLANKESLVTCG 132
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_CLOPS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens (strain SM101 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 675 K IS+LG TGSIGTQTLD++ H++ F +V + A NI L D +K F P+ VA+ +E ++ + + + K E++ G +G+++ A + VVT +VG GLKPTV AI GK+IALANKETL+ G V+ Sbjct: 2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTMDIIKEFSPKYVAINHEESYKKLVDLVKSEGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKNIALANKETLVVAGELVM 136
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_MOOTA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Moorella thermoacetica (strain ATCC 39073) GN=dxr PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.642e-26 Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP--EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I+VLGSTGSIG QTL++VA H +FRV AL A N LLA QV+RF+P++ + +E E LA + P ILAGE+G++ AA VV +VG LK +AA+EAGKDIALANKE L+A G V+ A Sbjct: 3 KEITVLGSTGSIGRQTLEVVAAHPGRFRVAALVAARNDELLAAQVRRFRPRLAVLLDE----ERARVLAEMVSDPGIRILAGEEGLMAAACLEGVELVVAAMVGIRSLKAILAALEAGKDIALANKEVLVAAGQLVMDRA 138
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_THERP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxr PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 62/132 (46.97%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 277 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 672 +S+LGSTGSIG QTL++VA H D+FRVVALAA S I L +QV+ F+P++VA+ ESL + +++G G++EAA + A VV + G +G++PT+AA AGK IALANKE+++ GP + Sbjct: 5 VSLLGSTGSIGRQTLEVVAAHPDRFRVVALAARSQIDALQEQVRIFRPELVAIAQESLGISFPDT--------RVVSGPGGLVEAATYETADIVVIALSGNSGIEPTLAAAAAGKTIALANKESVVCAGPLL 128
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACV8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxr PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I++LGSTGSIGTQ L ++ EH D + V AL A + + LL +Q ++F P+ V + NE ++KEAL+++ K + AG + + V+ +VG AGL+PT+ AI+AGK IALANKETL+ G + LA Sbjct: 3 KQIAILGSTGSIGTQALQVIEEHPDLYEVYALTANNRVDLLVEQARKFMPEAVVIANEEKYLQLKEALSDLPVK--VYAGADALSQIVESQPIDIVLASMVGYAGLRPTINAIKAGKAIALANKETLVVAGELINALA 138
BLAST of FC868877 vs. ExPASy Swiss-Prot
Match: DXR_BACTN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides thetaiotaomicron GN=dxr PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 62/138 (44.93%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 271 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA 684 K I++LGSTGSIGTQ L ++ EH D + AL A + + LL Q ++F+P+VV + NE ++KEAL+++ K + AG V + V+T +VG AGLKPT+ AI A K IALANKETL+ G + LA Sbjct: 10 KQIAILGSTGSIGTQALQVIEEHPDLYEAYALTANNRVELLIAQARKFQPEVVVIANEEKYAQLKEALSDLPIK--VYAGIDAVCQIVEAGPVDMVLTAMVGYAGLKPTINAIRAKKAIALANKETLVVAGELINQLA 145 The following BLAST results are available for this feature:
BLAST of FC868877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868877 ID=FC868877; Name=FC868877; organism=Citrus clementina; type=EST; length=718bpback to top |