FC868878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 2 Query: 98 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP 247 YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVLA +KR SP Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSP 59
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 62 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP 247 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVL V+K+ SP Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSP 59
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 62 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP 247 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVL V+K+ SP Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSP 59
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11 Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 2 Query: 98 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITS 244 YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +GVVL V+KR++S Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSS 57
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11 Identity = 29/50 (58.00%), Postives = 41/50 (82.00%), Query Frame = 2 Query: 98 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP 247 YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T +G+VLA +KR SP Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSP 59
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11 Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 98 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITS 244 YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +G+VL V+KR+ S Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNS 57
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 2 Query: 98 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITS 244 YDR + FSP+GRLFQVEYA EA+K GSTA+G+K K+GV L EK++ S Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRS 56
BLAST of FC868878 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11 Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 2 Query: 89 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP 247 +T YDR FSPEG L+QV YA EA+K G T++G+KT EGVV+A EKR P Sbjct: 9 QTAYDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGP 61 The following BLAST results are available for this feature:
BLAST of FC868878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868878 ID=FC868878; Name=FC868878; organism=Citrus clementina; type=EST; length=736bpback to top |