FC868888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 1.327e-75 Identity = 129/230 (56.09%), Postives = 160/230 (69.57%), Query Frame = 3 Query: 21 MTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVPGLLFSTSFSIIS 710 +TW VTCTYSQF+ +PTCCVSLSSFYN TIV CP C+CGC + T + P L + G+ P+ +CT HMCP+RVHWHVK++Y+EYWRVK+TITN+N NYS WNLVVQHPN +LTQLFSF Y+ L Y LNDT M WGI++YN+ + + +GNVQ+E++ +KD S FTF GWAFPRR+YF+G CVMPPPD YP LP P S + I S Sbjct: 204 VTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPELPA---GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQ---DGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIAS 427
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 3.268e-74 Identity = 129/238 (54.20%), Postives = 161/238 (67.65%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP-KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYE-GLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVPGLLFSTSFSIIS 710 R T + TW C YSQF + +P CCVSLS+FY + IV CPTC+CGC S C+ + P + P + P+V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN NY+ WNLVV HPN ++ Q+FSF YKSLTPY+ +NDT M WG++FYND L + G GNVQ+ELL +KD FTF +GWAFPRRI FNGD CVMP PD +P LP S+S ++IS Sbjct: 207 RKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCS-----SSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDFPRLPKSAHS--SSSSSAVIS 437
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 4.719e-73 Identity = 126/221 (57.01%), Postives = 163/221 (73.76%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKD---ASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYP 653 R T +MTWNV CTYSQFLAQK P+CCVSLSSF N+ V CPTC+CGC+N + +G C+ P L S+++ PG+ +P++QCTSHMCP++++WH+ L KE++RVKIT+TN NY MN++ WNLVVQ+ ++TQ+ F YKS+ + +NDT MLWG+K Y D L +AG GNVQ EL+ RKD +ST KG AFP R+YFNGDNCVMPPPDAYP Sbjct: 201 RATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQISGFNYKSIQVGK-INDTTMLWGVKPYYDLLMQAGPLGNVQGELIVRKDFRASSTTNNNKGRAFPVRVYFNGDNCVMPPPDAYP 420
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 60/231 (25.97%), Postives = 100/231 (43.29%), Query Frame = 3 Query: 24 TWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP--------------KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ--HPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSN----------GNVQSELLFRKDAST-FTFEKGWAFPRRIYFNGDNCVMP 635 +W + C +Q + P CCVS S+F+N++I+ C TCACGC + + S P L N P C + ++WH+ +Y+ W V+ITI N+ +++ W L VQ P + +SF L+ G+N+T + G+ + ++EA G QS + F K + + FP ++ FNG+ C++P Sbjct: 403 SWQIVCNITQAKTE-IPKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQMKKPALLGFEKAYSFNASLLSVDGGVNNTIFMEGLPGLDYLVAEADEKDPKKKNIRIPGKQQSVIQFSKKLTPGINVAERDGFPAKVIFNGEECLLP 631
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 65/239 (27.20%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 6 VTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTE-----SGSCINPKTPHLASVVNTPGK----------PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ----HPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEA-GSN--------GNVQSELLF-RKDASTFTFEKGWAFPRRIYFNGDNCVMP 635 VT+ + +W V C ++ AQ + CCVS S+FYN + V C TCACGC + T+ S + P L N K P + C + C + ++WHV +YK W ++T+ N+ + W + + P ++N ++SF + P N T + G+ N + + G+N G QS + F +K+ +G FP +++FNG+ C +P Sbjct: 410 VTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFNWR-DFAFEDWFVAIDMGKAGPGYEN---VYSFNGTRVPP---SNRTVIFQGLPGMNYLVGQVNGTNPLRDPPVPGKQQSVISFTKKNIKGLNIPEGDGFPTKLFFNGEECALP 639
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17 Identity = 57/230 (24.78%), Postives = 101/230 (43.91%), Query Frame = 3 Query: 24 TWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN------GTESGSCINPKTPHLASVVN----------TPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEK----------GWAFPRRIYFNGDNCVMP 635 +W V C +Q +P CCVS S+++N++IV C TCACGC +N + S + P+ L N +P + C + C + ++WH+ +Y+ W ++T+ N+ ++ W VQ N + + S G N+T + G+ N ++E +++ + K S +F K G FP +++FNG+ C +P Sbjct: 404 SWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFNWG-ETDFVDWFTAVQMKNAAPGFEKAYSFNASTIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKLTPGINVPGGDGFPSKVFFNGEECSLP 630
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 62/239 (25.94%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 9 THPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKP--NRPM----------------VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMN-----YSLWNLVVQHPNFDNLTQLFSFYYKSLTP------YEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLF-RKDASTFTFEKGWAFPRRIYFNGDNCVMP 635 T+ + +W V C ++ Q CCVS S+FYN++ + C TCACGC++ T++ N L +T P NR + + C + C I ++WH+ +Y W ++T+ FN+ N + +L ++N ++SF + P ++GL L GI + + G +QS + F +K+ + G FP+R++FNG+ C +P Sbjct: 401 TYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDT---CNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTL--FNWGNNAVEDWFGALDLGKAGLGYEN---IYSFNGSRVPPKNQTIFFQGLPGMNYLIGITNGTNPARDPQIPGKMQSVISFKKKNLGSLNIIGGDGFPKRVFFNGEECELP 629
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13 Identity = 54/231 (23.38%), Postives = 98/231 (42.42%), Query Frame = 3 Query: 24 TWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPK----TPHLASVVNTPGK----------PNRPM---VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGW----------AFPRRIYFNGDNCVMP 635 +W V C +Q P CCVS SS++N++++ C TCACG ++ + +C P+ A ++ + NR + + C + C + ++WH+ +Y+ W ++T+ N+ ++ W V+ N Q + S+ G N T ++ G+ N L+E + + K S +F K FP ++ FNG C +P Sbjct: 397 SWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFNWG-DTDFVDWFTAVELRNAAPGFQKAYSFNGSIIAVNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIPGKQQSVISFTKKLTPGIKVGSKDGFPTKVLFNGQECSLP 622 The following BLAST results are available for this feature:
BLAST of FC868888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868888 ID=FC868888; Name=FC868888; organism=Citrus clementina; type=EST; length=719bpback to top |