FC868891

Overview
NameFC868891
Unique NameFC868891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_ANATD (MutS2 protein OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.040e-40
Identity = 88/171 (51.46%), Postives = 114/171 (66.67%), Query Frame = 2
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VPIDI + +   VL+ITGPNTGGKT+ LKTVGL  ++ +SG+ I + E +++  F  +FADIGD+QS+ QSLSTFS H+K I  I            DEIGAGT+P EG AL  ++L+  +E GS + IATTH+GELK      D FENA  EFD   LKP Y++L G+PG
Sbjct:  314 VPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKV-IATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPG 483          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRMU (MutS2 protein OS=Streptococcus mutans GN=mutS2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 88/175 (50.29%), Postives = 111/175 (63.43%), Query Frame = 2
Query:   62 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            L++P+  D+     T  ++ITGPNTGGKTI LKT+G+  +MA+SGL IL+ E +KV  F  +FADIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL MS+LE    S  + T+ TTH+ ELK      +F ENA MEFD V L P Y  + GVPG
Sbjct:  307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFKDIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSILEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPG 480          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOK5 (MutS2 protein OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 2
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP+D+++ +    LVITGPNTGGKT+ LKT+GL  +MA SGL I + E + V +F  +FADIGDEQS+ Q+LSTFS H+  I NI            DE+GAGT+P EG AL +S+LE   + GS++ +ATTH+ ELK     ++  ENA +EFD   LKP YK++ G+PG
Sbjct:  315 VPMDVYMGKDFTCLVITGPNTGGKTVALKTMGLLHIMALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLILFDELGAGTDPTEGAALAVSILENLKDRGSMI-VATTHYSELKAYALKSNGVENASVEFDVDTLKPTYKLMIGIPG 484          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOK1 (MutS2 protein OS=Clostridium kluyveri (strain NBRC 12016) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 2
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP+D+++ +    LVITGPNTGGKT+ LKT+GL  +MA SGL I + E + V +F  +FADIGDEQS+ Q+LSTFS H+  I NI            DE+GAGT+P EG AL +S+LE   + GS++ +ATTH+ ELK     ++  ENA +EFD   LKP YK++ G+PG
Sbjct:  315 VPMDVYMGKDFTCLVITGPNTGGKTVALKTMGLLHIMALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLILFDELGAGTDPTEGAALAVSILENLKDRGSMI-VATTHYSELKAYALKSNGVENASVEFDVDTLKPTYKLMIGIPG 484          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOCE (MutS2 protein OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40
Identity = 85/171 (49.71%), Postives = 113/171 (66.08%), Query Frame = 2
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VPID +I  K   L++TGPNTGGKT+ LKTVGL  +M +SGL + +++  ++  F+ ++ADIGDEQS+ QSLSTFS H+K I +I            DE+GAGT+P EG AL MS+LE   + G+  T+ATTH+ ELK    S    ENA  EFD   L+P Y++L GVPG
Sbjct:  317 VPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFTLMMQSGLLVPANDGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILECLHQMGA-TTLATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPG 486          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACLD (MutS2 protein OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.162e-40
Identity = 89/177 (50.28%), Postives = 116/177 (65.54%), Query Frame = 2
Query:   56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            L L   VP DI +  +   +VITGPNTGGKT+ LKT+GL  MMA+SGLH+ + E ++   FD VFADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+   ++G+ + IATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  312 LPLDEVVPNDIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARV-IATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPG 487          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_EUBR3 (MutS2 protein OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40
Identity = 84/177 (47.46%), Postives = 115/177 (64.97%), Query Frame = 2
Query:   56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            L+    VPID+ +    + L+ITGPNTGGKT+ LKTVGL  +M ++GLHI +++ +K+  F+ VFADIGDEQS+ QSLSTFS H+  I  I            DE+ +GT+P EG AL +S+L    + G+ +T+ATTH+ ELK    S D  ENAC EF+   L P Y++L G+PG
Sbjct:  311 LDAKKVVPIDVRLGEDYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQYGA-ITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPG 486          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACSK (MutS2 protein OS=Bacillus clausii (strain KSM-K16) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40
Identity = 85/171 (49.71%), Postives = 116/171 (67.84%), Query Frame = 2
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP D+ I  + R LVITGPNTGGKT+ LKT+GL  +MA+SGL + ++E  ++  F+ +FADIGDEQS+ QSLSTFS H+K I +I            DE+GAGT+P EG AL +S+L+   + G+ L +ATTH+ ELK   Y+ +   NA +EFD   L+P Y++L GVPG
Sbjct:  318 VPSDMAIGDQVRSLVITGPNTGGKTVTLKTIGLLTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNENSLILFDELGAGTDPTEGAALAISILDHVYKRGA-LAVATTHYSELKGYAYNREGALNASVEFDVETLRPTYRLLVGVPG 487          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRS7 (MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.150e-39
Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 2
Query:   62 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            + +PV  D+  A    V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V  F+ ++ADIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG +L M++LE    + ++ T+ATTH+ ELK       + ENA M FD V LKP Y+ + GVPG
Sbjct:  307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPG 480          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STREM (MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.150e-39
Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 2
Query:   62 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            + +PV  D+  A    V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V  F+ ++ADIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG +L M++LE    + ++ T+ATTH+ ELK       + ENA M FD V LKP Y+ + GVPG
Sbjct:  307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPG 480          
The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS2_ANATD1.040e-4051.46MutS2 protein OS=Anaerocellum thermophilum (strain... [more]
MUTS2_STRMU3.026e-4050.29MutS2 protein OS=Streptococcus mutans GN=mutS2 PE=... [more]
MUTS2_CLOK53.026e-4049.71MutS2 protein OS=Clostridium kluyveri (strain ATCC... [more]
MUTS2_CLOK13.026e-4049.71MutS2 protein OS=Clostridium kluyveri (strain NBRC... [more]
MUTS2_CLOCE3.952e-4049.71MutS2 protein OS=Clostridium cellulolyticum (strai... [more]
MUTS2_BACLD5.162e-4050.28MutS2 protein OS=Bacillus licheniformis (strain DS... [more]
MUTS2_EUBR36.741e-4047.46MutS2 protein OS=Eubacterium rectale (strain ATCC ... [more]
MUTS2_BACSK6.741e-4049.71MutS2 protein OS=Bacillus clausii (strain KSM-K16)... [more]
MUTS2_STRS71.150e-3949.14MutS2 protein OS=Streptococcus equi subsp. zooepid... [more]
MUTS2_STREM1.150e-3949.14MutS2 protein OS=Streptococcus equi subsp. zooepid... [more]

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Properties
Property NameValue
Genbank descriptionC31006B05EF AbioticL1 Citrus clementina cDNA clone C31006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bp
CACGGAAAGGCGAAAAAGATCATCTCTTTCACCATCAGAGATGCAGGTTT
CTGCATTGGAACTTGCTCACCCGGTTCCGATTGATATTTTTATTGCTCGG
AAAACAAGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTAT
TTGCTTAAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTC
ACATTTTATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCAGTTTTT
GCTGATATTGGTGATGAACAGTCCTTGTCACAATCTTTATCTACCTTCTC
TGGCCACTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAAT
CGTTGGTGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGC
ACAGCGCTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTT
ATTGACAATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACA
GTAATGACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTA
AAGCCAGCTTACAAGATCCTTTGGGGAGTACCAGGTTACAGAATTATAAC
TTCTATCTATTTGATGTCTGAAGTGTTAATGAGTTTATTGATTTGGTTCT
TTCAAGCCTTAGTGATACAGCTGTAAGTCTTCCTGAAATTTACTCCATTT
TGTCAATA
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