FC868891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAES (MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mutS2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I I DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GVPG Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LACBA (MutS2 protein OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=mutS2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 85/188 (45.21%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 44 QVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 QV+ + HP V DI I R + +++TGPNTGGKTI LKT+ L +M +SGL I ++E + + FD +FADIGDEQS+ QSLSTFSGH++ I I DE+GAGT+P EG AL +++L+ GS + +A+TH+ ELK Y+ NA MEFD L+P Y +L G+PG Sbjct: 300 QVNLRQARHPLIDPKKVVANDITIGRDYKTIIVTGPNTGGKTITLKTLALVQLMGQSGLFIPANENSVIGIFDDIFADIGDEQSIEQSLSTFSGHMENIVAILRQADERSLIVVDELGAGTDPQEGAALAIAILDQMGTLGSYV-MASTHYPELKAYGYNRPETINASMEFDGETLQPTYHLLIGIPG 486
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_GEOKA (MutS2 protein OS=Geobacillus kaustophilus GN=mutS2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 83/177 (46.89%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L+ VP DI + +VITGPNTGGKT+ LKT+GL +MA++GL I +++ ++ F SVFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+ G+ T+ATTH+ ELK Y+ NA +EFD L+P YK+L G+PG Sbjct: 312 LDQEKAVPNDIELGGDYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGA-RTVATTHYPELKAYGYNRPGVVNASVEFDTETLRPTYKLLIGIPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_GEMAT (MutS2 protein OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=mutS2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 VP D+ + R ++++GPNTGGKT+ LK +GL MMA+ G+ E +++ FD ++AD+GDEQS+ SLSTFS HLK +G I DE+G+GT+P EG ALG ++LE G+ LT+ATTH G+LK L + NA ++FD V+L P Y++L GVPG Sbjct: 322 VPFDLTLHAGERTMLVSGPNTGGKTVLLKAIGLISMMAQCGVPAPLGETSQLAVFDDLYADVGDEQSIEASLSTFSAHLKNLGEILRSATTSSLVLIDELGSGTDPAEGAALGGAILETLTRRGT-LTLATTHLGQLKLLATDVEGVVNASLQFDAVQLAPTYRLLKGVPG 491
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLONN (MutS2 protein OS=Clostridium novyi (strain NT) GN=mutS2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 +I++ +VITGPNTGGKT+ LKTVGL +MA SGL I +S+ + + +F VFADIGDEQS+ QSLSTFS H+ I NI DE+GAGT+P EG AL +S+LE + + + IATTH+ ELK D ENA +EFD L+P Y++L GVPG Sbjct: 318 NIYLRDGITSVVITGPNTGGKTVTLKTVGLLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSADENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKV-IATTHYSELKAYALKVDNVENASVEFDVETLRPTYRLLIGVPG 484
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_EXIS2 (MutS2 protein OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=mutS2 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36 Identity = 77/171 (45.03%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 VPI + + + LVITGPNTGGKT+ LKT+GL +M +SGL++ +++ ++ FD+++ADIGDEQS+ Q+LSTFS H+ I ++ DE+GAGT+P EG AL +++L+ G+ + ATTH+ ELK Y+ + NA MEFD L P Y++L GVPG Sbjct: 318 VPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAIYADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILDEVKRRGARVA-ATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_OCEIH (MutS2 protein OS=Oceanobacillus iheyensis GN=mutS2 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.030e-36 Identity = 85/180 (47.22%), Postives = 114/180 (63.33%), Query Frame = 2 Query: 68 HP-VPIDIFIA------RKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 HP +PID +A R+ +VITGPNTGGKT+ LK VGL +MA+SGL + + + ++P FD VFADIGDEQS+ Q+LSTFS H+ I +I DE+G+GT+P EG AL M++L+ S IATTH+ ELK Y+ + NA +EF+ LKP Y++L GVPG Sbjct: 305 HPMIPIDEVVANDIEFGREYTSIVITGPNTGGKTVTLKLVGLCTLMAQSGLQVPALDGCEMPVFDEVFADIGDEQSIEQNLSTFSSHMTNIVDIMKKITDRSLVLFDELGSGTDPQEGAALAMAILDEVI-SKQARVIATTHYPELKAYGYNREQVVNASVEFNVETLKPTYRLLIGVPG 483
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LEUMM (MutS2 protein OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=mutS2 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.030e-36 Identity = 85/190 (44.74%), Postives = 116/190 (61.05%), Query Frame = 2 Query: 38 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 E +S + HP V DI + + ++ITGPNTGGKTI +KT+GL +MA+SGL I + + + + FD VFADIGDEQS+ Q+LSTFS H+ I ++ DE+GAGT+P EG AL +++L+ A G+ TIATTH+ ELK Y+ +NA M FD L+P Y+ L GVPG Sbjct: 300 ENHISLRQAWHPLLDKKIAVANDISLGDSYKTIIITGPNTGGKTITIKTLGLLQLMAQSGLFITTRQPSTIGIFDEVFADIGDEQSIEQNLSTFSSHMANIVSMLDHIDDKTLVIFDELGAGTDPAEGAALAIAILDKVASLGA-YTIATTHYPELKLYGYNRPETKNASMVFDVETLQPTYQFLMGVPG 488
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_PEDPA (MutS2 protein OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=mutS2 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.651e-36 Identity = 90/200 (45.00%), Postives = 120/200 (60.00%), Query Frame = 2 Query: 26 LSPSEMQVSAL------ELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L +E Q+SA E HP V DI + + LVITGPNTGGKTI LKTVGL +MA+SG+ I ++E + V F+ +FADIGDEQS+ Q+LSTFS H+ I DE+GAGT+P EG AL +++L+ +G+ +++ TTH+ ELKT Y NA MEFD L+P YK+L G+PG Sbjct: 288 LKATEPQISASNEINLREARHPLIDQKKVVSNDIRLGGEYETLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRIFEEIFADIGDEQSIEQNLSTFSSHMDNTIRILGNLNERSLALFDELGAGTDPKEGAALAIAILDKVRSTGA-VSMTTTHYPELKTYGYERMGTINASMEFDVDTLQPTYKLLLGIPG 486
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_FUSNN (MutS2 protein OS=Fusobacterium nucleatum subsp. nucleatum GN=mutS2 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36 Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 35 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 S ++ +LE A HP P+ I + +L+ITGPNTGGKT+ LKT GL +MA SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I DE+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L P Y++L G+PG Sbjct: 294 SNKEILSLEKARHPFIDKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPG 484 The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bpback to top |