FC868891

Overview
NameFC868891
Unique NameFC868891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAA9 (MutS2 protein OS=Staphylococcus aureus (strain JH9) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++  F +V+ DIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL MS+L+   + GSL+ +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAA8 (MutS2 protein OS=Staphylococcus aureus (strain NCTC 8325) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++  F +V+ DIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL MS+L+   + GSL+ +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAA3 (MutS2 protein OS=Staphylococcus aureus (strain USA300) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++  F +V+ DIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL MS+L+   + GSL+ +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAA2 (MutS2 protein OS=Staphylococcus aureus (strain JH1) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++  F +V+ DIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL MS+L+   + GSL+ +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAA1 (MutS2 protein OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++  F +V+ DIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL MS+L+   + GSL+ +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LACSS (MutS2 protein OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.007e-35
Identity = 85/191 (44.50%), Postives = 116/191 (60.73%), Query Frame = 2
Query:   35 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            +E  V   +  HP       V  DI I    + +V+TGPNTGGKTI LKT+GL  +MA+SGL I + E ++V  F  +FADIGDEQS+ Q+LSTFS H++ I  I            DE+GAGT+P EG AL +++L+     G+ + +A+TH+ ELK   Y+     NA MEFD   L+P Y++L GVPG
Sbjct:  297 AENHVDLKQARHPLIDATKVVANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSDIFADIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSLVLLDELGAGTDPQEGAALAIAILDQIGIVGANV-VASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPG 486          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_ENTFA (MutS2 protein OS=Enterococcus faecalis GN=mutS2 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.007e-35
Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 2
Query:   83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            DI I  + + +VITGPNTGGKTI LKT+GL  +M ++GL I   E +K+  F  VFADIGDEQS+ QSLSTFS H+  I ++            DE+GAGT+P EG AL +++L++    G+ + +ATTH+ ELK   Y+     NA MEFD   L P Y++L GVPG
Sbjct:  320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPG 486          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LACLS (MutS2 protein OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.999e-35
Identity = 80/168 (47.62%), Postives = 107/168 (63.69%), Query Frame = 2
Query:   83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            DI   R    +VITGPNTGGKTI LKTVGL  ++A+SGL IL+ + +++  FD +FADIGDEQS+ QSLSTFS H+  I  I            DE+GAGT+P EG AL +++LE   +  ++ T+A+TH+ ELK          NA MEF+  K++P Y +  GVPG
Sbjct:  316 DIKFDRTLNTIVITGPNTGGKTITLKTVGLLTILAQSGLPILADDGSRIHLFDDIFADIGDEQSIEQSLSTFSSHMTNIVQILAQADENSLVLFDELGAGTDPKEGAALAIAILENLRKR-NVKTMASTHYPELKAYGVKTQQVINASMEFNIDKMQPTYHLQLGVPG 482          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LEUCK (MutS2 protein OS=Leuconostoc citreum (strain KM20) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35
Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 2
Query:   35 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            +E +V   +  HP       V  DI +    + ++ITGPNTGGKTI +KT+G+  +MA+SGL I +   + V  F  +FADIGDEQS+ QSLSTFS H+  I ++            DE+GAGT+P EG AL +++L+  A  G+ + IATTH+ ELK   Y+     NA M FD   LKP Y+ L GVPG
Sbjct:  299 TENKVDLQQAWHPLLDKDLAVANDIALGDGYKAIIITGPNTGGKTITIKTLGILQLMAQSGLFITTKRPSTVGVFHEIFADIGDEQSIEQSLSTFSSHMANIVSMIDRIDDKTLVIFDELGAGTDPAEGAALAIAILDKVASLGAFV-IATTHYPELKLYGYNRPETLNASMVFDVSTLKPTYQFLMGVPG 488          
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LACLA (MutS2 protein OS=Lactococcus lactis subsp. lactis GN=mutS2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35
Identity = 80/168 (47.62%), Postives = 108/168 (64.29%), Query Frame = 2
Query:   83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            DI        +VITGPNTGGKTI LKTVGL  ++A+SGL IL+++ +++  FD +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +++LE   E  ++ T+A+TH+ ELK          NA MEF+  K++P Y +  GVPG
Sbjct:  316 DIKFDAGLNTIVITGPNTGGKTITLKTVGLLTILAQSGLPILAADGSRIHLFDDIFADIGDEQSIEQSLSTFSSHMTNIVHILAQADENSLVLFDELGAGTDPKEGAALAIAILENLRER-NVKTMASTHYPELKAYGVETQRVINASMEFNIDKMQPTYHLQLGVPG 482          
The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS2_STAA97.713e-3650.00MutS2 protein OS=Staphylococcus aureus (strain JH9... [more]
MUTS2_STAA87.713e-3650.00MutS2 protein OS=Staphylococcus aureus (strain NCT... [more]
MUTS2_STAA37.713e-3650.00MutS2 protein OS=Staphylococcus aureus (strain USA... [more]
MUTS2_STAA27.713e-3650.00MutS2 protein OS=Staphylococcus aureus (strain JH1... [more]
MUTS2_STAA17.713e-3650.00MutS2 protein OS=Staphylococcus aureus (strain Mu3... [more]
MUTS2_LACSS1.007e-3544.50MutS2 protein OS=Lactobacillus sakei subsp. sakei ... [more]
MUTS2_ENTFA1.007e-3548.21MutS2 protein OS=Enterococcus faecalis GN=mutS2 PE... [more]
MUTS2_LACLS4.999e-3547.62MutS2 protein OS=Lactococcus lactis subsp. cremori... [more]
MUTS2_LEUCK6.529e-3543.98MutS2 protein OS=Leuconostoc citreum (strain KM20)... [more]
MUTS2_LACLA6.529e-3547.62MutS2 protein OS=Lactococcus lactis subsp. lactis ... [more]

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Properties
Property NameValue
Genbank descriptionC31006B05EF AbioticL1 Citrus clementina cDNA clone C31006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bp
CACGGAAAGGCGAAAAAGATCATCTCTTTCACCATCAGAGATGCAGGTTT
CTGCATTGGAACTTGCTCACCCGGTTCCGATTGATATTTTTATTGCTCGG
AAAACAAGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTAT
TTGCTTAAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTC
ACATTTTATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCAGTTTTT
GCTGATATTGGTGATGAACAGTCCTTGTCACAATCTTTATCTACCTTCTC
TGGCCACTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAAT
CGTTGGTGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGC
ACAGCGCTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTT
ATTGACAATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACA
GTAATGACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTA
AAGCCAGCTTACAAGATCCTTTGGGGAGTACCAGGTTACAGAATTATAAC
TTCTATCTATTTGATGTCTGAAGTGTTAATGAGTTTATTGATTTGGTTCT
TTCAAGCCTTAGTGATACAGCTGTAAGTCTTCCTGAAATTTACTCCATTT
TGTCAATA
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