FC868891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_THEP1 (MutS2 protein OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=mutS2 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 VPI++ + R +ITGPN GGKT+ +KTVGL + SG + E ++ F + ADIG+EQS+ QSLSTFS H+K+I I DE+G+GT+P+EG AL ++++E E G+ + + TTH +K ++ NA MEFD L P Y++L GVPG Sbjct: 304 VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAIIEDLLEKGATIFV-TTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPG 473
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_THEMA (MutS2 protein OS=Thermotoga maritima GN=mutSB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 VPI++ + R +ITGPN GGKT+ +KTVGL + SG + E ++ F + ADIG+EQS+ QSLSTFS H+K+I I DE+G+GT+P+EG AL ++++E E G+ + + TTH +K ++ NA MEFD L P Y++L GVPG Sbjct: 304 VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAIAIIEDLLEKGATIFV-TTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPG 473
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_SULSY (MutS2 protein OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=mutS2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG----YRIITSIYLMSEVL 628 +PIDI + K R LVITGPNTGGKT+ LKT GL ++ +S + I E +K+P F+ +F DIGD QS+ ++LST+S H+K I + DE+ GT+P +A+G+++L+ + + ++ IATTH ++K +ND+F+ A + FD+ L P YKI + G + I + L E++ Sbjct: 314 IPIDILLDEK-RGLVITGPNTGGKTVALKTAGLLSLIFQSAIAIPVDEGSKIPIFNGIFIDIGDYQSIEENLSTYSAHIKNIREMLDLANKNSLLLFDELIPGTDPDFASAIGIAILD-YVKEKNIRVIATTHLKKIKAYVLNNDYFKIAAVGFDKETLTPTYKIYYNAVGESMAFYIAQKLNLQKEII 500
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_DESMR (MutS2 protein OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=mutS2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28 Identity = 69/187 (36.90%), Postives = 100/187 (53.48%), Query Frame = 2 Query: 56 LELAHP---VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPGYRIITSI 607 L LA P V D+ +A R L++TG N GGKT+CLKT+GL MA SGL + + E + +P+F +F +GDEQSL LSTF+ ++ + + DE GAGT+P +G AL ++++ + G+ L A TH LK S + ACM FD KP Y++ + G I + Sbjct: 308 LALAGPDSAVAQDLELAPDQRALIVTGANAGGKTVCLKTLGLLAAMALSGLPVPAGEGSSLPFFAKIFVFLGDEQSLEDHLSTFTAQIRHLSRVWPDIDADTLVLLDEFGAGTDPSQGAALAQAVVDGLLDRGAYLA-AATHFPALKAYGLSREGVRAACMLFDPATKKPLYRLAYDQVGASIALDV 493
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BORBU (MutS2 protein OS=Borrelia burgdorferi GN=mutSB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 89 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 F + RV++ITGPN GGKT+ LKT+GL M + G+ I+ E + FD++F DIGDEQS+S SLSTFS H+ I I DE +GT+ +G AL +S+LE S + I +TH+ LK Y+++ NA M D ++P Y +++ +PG Sbjct: 322 FTPAENRVVIITGPNAGGKTVTLKTIGLLSAMFQFGIPIVVGESSTFKIFDNIFIDIGDEQSISNSLSTFSSHMSNISYILKHTTKDSLVIFDEFCSGTDIDQGQALAISILEYLININSYVLI-STHYNALKYFAYTHEGVVNASMRMDLETMQPNYNLIFSIPG 486
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_ANADF (MutS2 protein OS=Anaeromyxobacter sp. (strain Fw109-5) GN=mutS2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.612e-25 Identity = 64/186 (34.41%), Postives = 103/186 (55.38%), Query Frame = 2 Query: 56 LELAHP---------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L L HP VP + + R L+++GPN GGKT+ + VGL+ +M ++GL + ++E +++P+F V A + + L++ LSTF+ HL + + DEI A T+P EG AL ++LE+ E G+ + + TTH ELK L ++ + NA + FD +L P Y++ G PG Sbjct: 312 LSLRHPLLVLQGKKVVPSHVRLDAPARALIVSGPNGGGKTVAITAVGLSALMLRAGLPVAAAEGSRLPFFLEVKAAVDERGDLAKDLSTFTAHLAAVKEMLAGAVPGSLILVDEIAADTDPREGAALAAAILESLVERGAAV-LVTTHLDELKALALTDPRYANARVGFDAERLAPTYQLHLGSPG 496
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_DESAD (MutS2 protein OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=mutS2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24 Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 77 PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPGYRIITSI 607 P++I + +VL+++G N GGKT+CLKTVGL MA SG+ + + + +P F +F +GDEQSL +++STFS ++ I I DE G+GT+P +G AL ++++ E+G + A TH LKT + A + FD KP + + + G I + Sbjct: 319 PLNIELPTDQKVLIVSGGNAGGKTVCLKTVGLLSAMAFSGIPVPVEKGSVLPLFKEIFVIMGDEQSLEENVSTFSAQIQSISRIWDSMDSSTLFILDEFGSGTDPAQGAALAQAVVDGLLENG-VTCFAATHFPALKTYALVTEGVRAASVLFDPSTKKPLFSLAYDQVGASIALDV 494
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_BUCAT (DNA mismatch repair protein mutS OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=mutS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = 2 Query: 47 VSALELAHPV----------PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 520 +S LE HPV +F++R R+++ITGPN GGK+ ++ + L V+MA G + + YA + D +F IG LS STF + +I NI DE+G GT+ EG +L S +T+ +TH EL L+ F +N Sbjct: 581 ISLLESRHPVVECFLKTPFIKNSVFLSRTQRMIIITGPNMGGKSTYMRQIALIVIMAGIGSFV-PARYALIGSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLIDELGRGTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEKFVKN 747
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_BUCAI (DNA mismatch repair protein mutS OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mutS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = 2 Query: 47 VSALELAHPV----------PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 520 +S LE HPV +F++R R+++ITGPN GGK+ ++ + L V+MA G + + YA + D +F IG LS STF + +I NI DE+G GT+ EG +L S +T+ +TH EL L+ F +N Sbjct: 581 ISLLESRHPVVECFLKTPFIKNSVFLSRTQRMIIITGPNMGGKSTYMRQIALIVIMAGIGSFV-PARYALIGSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLIDELGRGTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEKFVKN 747
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_BUCA5 (DNA mismatch repair protein mutS OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=mutS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = 2 Query: 47 VSALELAHPV----------PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 520 +S LE HPV +F++R R+++ITGPN GGK+ ++ + L V+MA G + + YA + D +F IG LS STF + +I NI DE+G GT+ EG +L S +T+ +TH EL L+ F +N Sbjct: 581 ISLLESRHPVVECFLKTPFIKNSVFLSRTQRMIIITGPNMGGKSTYMRQIALIVIMAGIGSFV-PARYALIGSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLIDELGRGTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEKFVKN 747 The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bpback to top |