FC868891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_BACWK (DNA mismatch repair protein mutS OS=Bacillus weihenstephanensis (strain KBAB4) GN=mutS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 47/149 (31.54%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 520 VP D + K V +ITGPN GK+ ++ + L +M++ G + ++E A +P FD +F IG L STF + + N DEIG GT+ +G AL +++E + T+ +TH+ EL L+ S D +N Sbjct: 590 VPNDCIMPEKMDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATE-AVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKN 737
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_BACCR (DNA mismatch repair protein mutS OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=mutS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 47/149 (31.54%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 520 VP D + K V +ITGPN GK+ ++ + L +M++ G + ++E A +P FD +F IG L STF + + N DEIG GT+ +G AL +++E + T+ +TH+ EL L+ S D +N Sbjct: 584 VPNDCIMPEKMDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATE-AVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKN 731
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_BACC2 (DNA mismatch repair protein mutS OS=Bacillus cereus (strain G9842) GN=mutS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 47/149 (31.54%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 520 VP D + K V +ITGPN GK+ ++ + L +M++ G + ++E A +P FD +F IG L STF + + N DEIG GT+ +G AL +++E + T+ +TH+ EL L+ S D +N Sbjct: 590 VPNDCIMPEKMDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATE-AVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKN 737
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MSH3_PICST (DNA mismatch repair protein MSH3 OS=Pichia stipitis GN=MSH3 PE=3 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESG-SLLTIATTHHGELKTLKYS 502 VP DI I +VL+ITGPN GGK+ +K V L V+M++ G +I + A + FDS+F +G ++ + STF + + NI DEIG GT +G AL S+L ES L + TH+ L L+ S Sbjct: 775 VPNDIDICYDNKVLIITGPNMGGKSSYVKQVALLVIMSQIGCYI-PCDRATLGVFDSIFIRMGASDNILKGNSTFMNEMLECSNIIHGISNKSLVILDEIGRGTGTSDGIALAYSILRYLIESPLRPLVLFITHYPSLHVLEDS 917
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_TERTT (DNA mismatch repair protein mutS OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mutS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 43/140 (30.71%), Postives = 72/140 (51.43%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 493 +P D+ + + R+L+ITGPN GGK+ ++ L V++A+ G ++ +E ++ D +F IG L+ STF + + NI DEIG GT+ +G +L + +E AE T+ TH+ E+ L Sbjct: 604 IPNDLTLNAQQRMLIITGPNMGGKSTYMRQTALIVLLAQVGSYV-PAEACRLGLVDRIFTRIGSSDDLAGGRSTFMVEMTETANILNNATSDSLVLMDEIGRGTSTYDGLSLAWACVEHLAEKLKSFTLFATHYFEITAL 742
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_STAAW (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain MW2) GN=mutS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 547 VP + + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG L STF + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 585 VPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_STAAU (DNA mismatch repair protein mutS OS=Staphylococcus aureus GN=mutS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 547 VP + + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG L STF + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 585 VPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_STAAT (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=mutS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 547 VP + + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG L STF + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 585 VPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_STAAS (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain MSSA476) GN=mutS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 547 VP + + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG L STF + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 585 VPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS_STAAR (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain MRSA252) GN=mutS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 547 VP + + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG L STF + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 585 VPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741 The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bpback to top |