FC868891

Overview
NameFC868891
Unique NameFC868891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOB1 (MutS2 protein OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39
Identity = 89/187 (47.59%), Postives = 118/187 (63.10%), Query Frame = 2 
Query:   47 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            V  +E  HP       VPI + +  +   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F++VFADIGDEQS+ QSLSTFS H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+PG
Sbjct:  299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGIPG 484
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRZP (MutS2 protein OS=Streptococcus pneumoniae (strain P1031) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRZJ (MutS2 protein OS=Streptococcus pneumoniae (strain JJA) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRR6 (MutS2 protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPS (MutS2 protein OS=Streptococcus pneumoniae (strain CGSP14) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPN (MutS2 protein OS=Streptococcus pneumoniae GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPJ (MutS2 protein OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPI (MutS2 protein OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP7 (MutS2 protein OS=Streptococcus pneumoniae (strain 70585) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP2 (MutS2 protein OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 2 
Query:   44 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            ++  L + HP     V  D++  +    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GVPG
Sbjct:  296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG 480
The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS2_CLOB13.346e-3947.59MutS2 protein OS=Clostridium botulinum (strain ATC... [more]
MUTS2_STRZP5.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRZJ5.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRR65.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRPS5.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRPN5.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae GN=mutS2... [more]
MUTS2_STRPJ5.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRPI5.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRP75.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRP25.707e-3946.24MutS2 protein OS=Streptococcus pneumoniae serotype... [more]

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Properties
Property NameValue
Genbank descriptionC31006B05EF AbioticL1 Citrus clementina cDNA clone C31006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bp
CACGGAAAGGCGAAAAAGATCATCTCTTTCACCATCAGAGATGCAGGTTT
CTGCATTGGAACTTGCTCACCCGGTTCCGATTGATATTTTTATTGCTCGG
AAAACAAGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTAT
TTGCTTAAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTC
ACATTTTATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCAGTTTTT
GCTGATATTGGTGATGAACAGTCCTTGTCACAATCTTTATCTACCTTCTC
TGGCCACTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAAT
CGTTGGTGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGC
ACAGCGCTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTT
ATTGACAATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACA
GTAATGACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTA
AAGCCAGCTTACAAGATCCTTTGGGGAGTACCAGGTTACAGAATTATAAC
TTCTATCTATTTGATGTCTGAAGTGTTAATGAGTTTATTGATTTGGTTCT
TTCAAGCCTTAGTGATACAGCTGTAAGTCTTCCTGAAATTTACTCCATTT
TGTCAATA
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