FC868891

Overview
NameFC868891
Unique NameFC868891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC3 (MutS2 protein OS=Bacillus cereus (strain 03BB102) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC2 (MutS2 protein OS=Bacillus cereus (strain G9842) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC1 (MutS2 protein OS=Bacillus cereus (strain ATCC 10987) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC0 (MutS2 protein OS=Bacillus cereus (strain AH820) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACAH (MutS2 protein OS=Bacillus thuringiensis (strain Al Hakam) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LISMO (MutS2 protein OS=Listeria monocytogenes GN=mutS2 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38
Identity = 86/177 (48.59%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:   56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            L+ A  V  DI++      +VITGPNTGGKTI LKT+GL  +MA+SGL I + E + +  F+ VFADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +++L+A  E G+ + +ATTH+ ELK   Y+     NA +EF+   L P YK+L GVPG
Sbjct:  312 LDAAKVVANDIYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNQKSLILYDELGAGTDPQEGAALAIAILDASHEKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACWK (MutS2 protein OS=Bacillus weihenstephanensis (strain KBAB4) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ Q+LSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACAN (MutS2 protein OS=Bacillus anthracis GN=mutS2 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P +K+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACAC (MutS2 protein OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P +K+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLIGVPG 487
[Close]
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACAA (MutS2 protein OS=Bacillus anthracis (strain A0248) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:   74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586
            VP +I + +    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDEQS+ QSLSTFS H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P +K+L GVPG
Sbjct:  318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLIGVPG 487
The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS2_BACC32.832e-3848.54MutS2 protein OS=Bacillus cereus (strain 03BB102) ... [more]
MUTS2_BACC22.832e-3848.54MutS2 protein OS=Bacillus cereus (strain G9842) GN... [more]
MUTS2_BACC12.832e-3848.54MutS2 protein OS=Bacillus cereus (strain ATCC 1098... [more]
MUTS2_BACC02.832e-3848.54MutS2 protein OS=Bacillus cereus (strain AH820) GN... [more]
MUTS2_BACAH2.832e-3848.54MutS2 protein OS=Bacillus thuringiensis (strain Al... [more]
MUTS2_LISMO3.699e-3848.59MutS2 protein OS=Listeria monocytogenes GN=mutS2 P... [more]
MUTS2_BACWK6.310e-3847.95MutS2 protein OS=Bacillus weihenstephanensis (stra... [more]
MUTS2_BACAN1.076e-3747.95MutS2 protein OS=Bacillus anthracis GN=mutS2 PE=3 ... [more]
MUTS2_BACAC1.076e-3747.95MutS2 protein OS=Bacillus anthracis (strain CDC 68... [more]
MUTS2_BACAA1.076e-3747.95MutS2 protein OS=Bacillus anthracis (strain A0248)... [more]

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Properties
Property NameValue
Genbank descriptionC31006B05EF AbioticL1 Citrus clementina cDNA clone C31006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bp
CACGGAAAGGCGAAAAAGATCATCTCTTTCACCATCAGAGATGCAGGTTT
CTGCATTGGAACTTGCTCACCCGGTTCCGATTGATATTTTTATTGCTCGG
AAAACAAGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTAT
TTGCTTAAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTC
ACATTTTATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCAGTTTTT
GCTGATATTGGTGATGAACAGTCCTTGTCACAATCTTTATCTACCTTCTC
TGGCCACTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAAT
CGTTGGTGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGC
ACAGCGCTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTT
ATTGACAATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACA
GTAATGACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTA
AAGCCAGCTTACAAGATCCTTTGGGGAGTACCAGGTTACAGAATTATAAC
TTCTATCTATTTGATGTCTGAAGTGTTAATGAGTTTATTGATTTGGTTCT
TTCAAGCCTTAGTGATACAGCTGTAAGTCTTCCTGAAATTTACTCCATTT
TGTCAATA
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