FC868891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LACCB (MutS2 protein OS=Lactobacillus casei (strain BL23) GN=mutS2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIGDEQS+ Q+LSTFS H+ I +I DE+GAGT+P EG AL +++L+A E G+ + +ATTH+ ELK Y+ NA MEFD L+P Y++L GVPG Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPG 485
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LACC3 (MutS2 protein OS=Lactobacillus casei (strain ATCC 334) GN=mutS2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIGDEQS+ Q+LSTFS H+ I +I DE+GAGT+P EG AL +++L+A E G+ + +ATTH+ ELK Y+ NA MEFD L+P Y++L GVPG Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPG 485
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACSU (MutS2 protein OS=Bacillus subtilis GN=mutSB PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+ VFADIGDEQS+ QSLSTFS H+ I I DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y+ + NA +EFD L P YK+L GVPG Sbjct: 321 DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_BACA2 (MutS2 protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=mutS2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 83 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 DI + +VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD+VFADIGDEQS+ QSLSTFS H+ I NI DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y+ NA +EFD L P YK+L GVPG Sbjct: 321 DIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAS1 (MutS2 protein OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 82/167 (49.10%), Postives = 112/167 (67.07%), Query Frame = 2 Query: 86 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 I A+ ++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I I DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GVPG Sbjct: 323 IEFAQDIETVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPG 488
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LISMH (MutS2 protein OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 85/177 (48.02%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L+ A V DI++ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+ VFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+A G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GVPG Sbjct: 312 LDAAKVVANDIYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILENVNQKSLILYDELGAGTDPQEGAALAIAILDASHAKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LISMF (MutS2 protein OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 85/177 (48.02%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L+ A V DI++ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+ VFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+A G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GVPG Sbjct: 312 LDAAKVVANDIYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILGNVNQKSLILYDELGAGTDPQEGAALAIAILDASHAKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LISMC (MutS2 protein OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 85/177 (48.02%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L+ A V DI++ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+ VFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+A G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GVPG Sbjct: 312 LDAAKVVANDIYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILGNVNQKSLILYDELGAGTDPQEGAALAIAILDASHAKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_LISIN (MutS2 protein OS=Listeria innocua GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 84/177 (47.46%), Postives = 114/177 (64.41%), Query Frame = 2 Query: 56 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L+ V DI++ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F++VFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+A + G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GVPG Sbjct: 312 LDAEKVVANDIYLGEDFSTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFENVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNHKSLILYDELGAGTDPQEGAALAIAILDASHKKGASV-VATTHYPELKAYGYNRAHATNASVEFNVETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_GEOSW (MutS2 protein OS=Geobacillus sp. (strain WCH70) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 85/187 (45.45%), Postives = 118/187 (63.10%), Query Frame = 2 Query: 47 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 + L+ HP VP DI + + +VITGPNTGGKT+ LKT+GL +MA++GL I + + +++ F SV+ADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+ G+ T+ATTH+ ELK Y+ D NA +EFD L+P YK+L G+PG Sbjct: 302 IRLLQARHPLIDQDVVVPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPALDGSELAVFRSVYADIGDEQSIEQSLSTFSSHMVNIVDILRNVDHESLVLFDELGAGTDPQEGAALAIAILDEVHGRGA-RTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYKLLIGIPG 487 The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bpback to top |