FC868891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_THERP (MutS2 protein OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37 Identity = 82/171 (47.95%), Postives = 110/171 (64.33%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 VPID+ + + R+LVITGPNTGGKT+ LKTVGL +MA++GL I ++ + + F ++F DIGDEQS+ Q+LSTFS H+++I DEI AGT+P EG AL ++LE E G+ L I TTH+ ELK ENA +EFD V L P Y++L G+PG Sbjct: 327 VPIDVELGERFRILVITGPNTGGKTVALKTVGLLALMAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRRIVATLQQADASSLVLLDEIAAGTDPQEGAALARAILERLLEIGA-LGIVTTHYPELKVFATGTPGLENASVEFDPVTLSPTYRLLVGLPG 496
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAHJ (MutS2 protein OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37 Identity = 81/158 (51.27%), Postives = 109/158 (68.99%), Query Frame = 2 Query: 113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I I DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GVPG Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPG 489
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOD6 (MutS2 protein OS=Clostridium difficile (strain 630) GN=mutS2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37 Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 2 Query: 86 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P+EG AL +++LE G+ IATTH+ ELK + ENA +EFD L P YK+L GVPG Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVGA-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_TREDE (MutS2 protein OS=Treponema denticola GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 2 Query: 74 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 VPID+ +++ RVL+ITGPNTGGKT+ LKT L ++ ++G + + ++P+FD + DIGDEQS+ QSLSTFS H+K + I DE+G+GT+P EG A+ M++L+ E + + + TTHHG LK YS + NA +EF++ L P Y+IL GVPG Sbjct: 335 VPIDLKLSKDDRVLIITGPNTGGKTVSLKTAALFALINQTGWPVPAGPLTRLPYFDFIACDIGDEQSMDQSLSTFSAHMKNVSEIIRRAGDKSLIILDELGSGTDPQEGCAIAMAVLDDLLEKKAFVFV-TTHHGALKNYGYSKESCVNASVEFNQNTLSPTYRILMGVPG 504
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_GEOTN (MutS2 protein OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.341e-37 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 2 Query: 56 LELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 L+ HP VP DI + +VITGPNTGGKT+ LKTVGL +MA++GL I +++ ++ F SVFADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +++L+ G+ T+ATTH+ ELK Y+ NA +EFD L+P YK+L G+PG Sbjct: 305 LQARHPLIDQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLKTVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHVDEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGA-RTVATTHYPELKAYGYNRPGVVNASVEFDTETLRPTYKLLIGIPG 487
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOTE (MutS2 protein OS=Clostridium tetani GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.341e-37 Identity = 84/187 (44.92%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 47 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 V +E HP VP DI++ + L+ITGPNTGGKT+ LKT+GL +M SGL I + E + + +F+ +FADIGDEQS+ QSLSTFS H+ I +I DE+GAGT+P EG AL +S+LE + +ATTH+ ELK + ENA +EFD L+P Y++L G+PG Sbjct: 299 VDIIEGKHPLIDTEKVVPTDIYLGKDFTSLIITGPNTGGKTVTLKTLGLIHIMGLSGLLIPAKENSTIAFFEEIFADIGDEQSIEQSLSTFSSHMVNIVDIISKADHKSLVLFDELGAGTDPTEGAALAISILENLRRRKCKI-VATTHYSELKGYALKTEDVENASVEFDVETLRPTYRLLIGIPG 484
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_STAEQ (MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 113 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I I DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GVPG Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPG 488
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOPS (MutS2 protein OS=Clostridium perfringens (strain SM101 / Type A) GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 83/187 (44.39%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 47 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 + ++ HP V DI++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+ I I DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK + ENA +EF+ L+P Y++L GVPG Sbjct: 299 IDLMDARHPLIPKDKVVSSDIYLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPG 484
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOPE (MutS2 protein OS=Clostridium perfringens GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 83/187 (44.39%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 47 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 + ++ HP V DI++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+ I I DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK + ENA +EF+ L+P Y++L GVPG Sbjct: 299 IDLMDARHPLIPKDKVVSSDIYLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVRIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPG 484
BLAST of FC868891 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOP1 (MutS2 protein OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=mutS2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 83/187 (44.39%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 47 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGVPG 586 + ++ HP V DI++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+ I I DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK + ENA +EF+ L+P Y++L GVPG Sbjct: 299 IDLMDARHPLIPKDKVVSSDIYLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPG 484 The following BLAST results are available for this feature:
BLAST of FC868891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868891 ID=FC868891; Name=FC868891; organism=Citrus clementina; type=EST; length=708bpback to top |