FC868897

Overview
NameFC868897
Unique NameFC868897
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.926e-21
Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1
Query:  184 GEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGTRQPG 630
            G  ++  K+ + G+CH+DLH +K +W   +  P++ GHE  GVV   G  V    FK+GD+ G+  + GSC SC+ C    E  CP   ++       G    G +    +       +IP+  PLDA AP+LCAGITVY  L+  G R PG
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLS-------GYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGAR-PG 173          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = 1
Query:   91 PEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            P Q  P+        +T G L     +       ++   V + G+CHSDLH    +W   + +P++ GHE  GVV ++GS V  +KVGD  G+  + G+C SC+ C +  E+ CP +  T  +  HDGT     + +   AD      IP    L   AP+LCAGITVY  L+
Sbjct:    2 PSQVIPEKQKAIVFYETDGKLEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFT--HDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = 1
Query:   91 PEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            P Q  P+        +T G L     +       ++   V + G+CHSDLH    +W   + +P++ GHE  GVV ++GS V  +KVGD  G+  + G+C SC+ C +  E+ CP +  T  +  HDGT     + +   AD      IP    L   AP+LCAGITVY  L+
Sbjct:    2 PSQVIPEKQKAIVFYETDGKLEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFT--HDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20
Identity = 52/150 (34.67%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  184 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGTRQPG 630
            G   +  K+ + G+CH+DLH +   W   +  P+V GHE  G+V   G  V +F++GD+ G+  + GSC  C+ C    +  C +  ++       G    G +    +       +IP G PLDA AP+LCAGITVY  L+  G R PG
Sbjct:   30 GPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLS-------GYTVDGTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVR-PG 171          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  193 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            ++   V + G+CH+DLH  K +W      P+V GHE  GVV  +G  V  + +GD  G+  + GSC SC+ C +  E+ CP   +  +   HDG+     +     AD     RIP+G  L   AP+LCAG+TVY  L+
Sbjct:   59 EILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALK 190          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  193 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            ++   V + G+CH+DLH  K +W  +   P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP G  L   AP+LCAG+TVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALK 164          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  193 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            ++   V + G+CH+DLH  K +W      P+V GHE  GVV  +G  V  + +GD  G+  + GSC SC+ C +  E+ CP   +  +   HDG+     +     AD     RIP+G  L   AP+LCAG+TVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALK 164          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 1
Query:  193 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            ++   V + G+CH+DLH  K +W      P+V GHE  GVV  +G  V  +K+GD  G+  + GSC SC+ C +  E+ CP+  +  +   HDG+     +     AD     +IP G  L   AP+LCAG+TVY  L+
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADL--SGYTHDGS-----FQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALK 166          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  193 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            ++   V + G+CH+DLH  + +W  +   P+V GHE  G+V  +G  V+ +++GD  G+  + GSC SC+ C +  E  CPK  +  +   HDG+     +     AD     RIP+   L   AP+LCAG+TVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADL--SGYTHDGS-----FQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALK 164          
BLAST of FC868897 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 1
Query:  193 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDGCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 606
            ++   V + G+CH+DLH  K +W  +   P+V GHE  GVV  +G  V+ +++GD  G+  + GSC  C+ C    E+ CP   +  +   HDG+     +     AD     RIP+G  L   AP+LCAGITVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADL--SGYTHDGS-----FQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALK 164          
The following BLAST results are available for this feature:
BLAST of FC868897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
ADH3_EMENI4.926e-2136.84Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH5_YEAST1.433e-2034.10Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS1.433e-2034.10Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH1_EMENI3.193e-2034.67Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH3_KLULA5.447e-2036.69Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
ADH2_KLUMA9.291e-2035.97Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH2_KLULA9.291e-2036.69Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]
ADH1_KLULA9.291e-2036.69Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH1_KLUMA1.213e-1935.25Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH2_PICST2.703e-1936.69Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31006C01EF AbioticL1 Citrus clementina cDNA clone C31006C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868897 ID=FC868897; Name=FC868897; organism=Citrus clementina; type=EST; length=676bp
GATTGCACCTTGTTTATTCAAATACCCTGGACGTCAAACTAAGCCAACAA
GCACCAATATCATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCAAG
AGCACCCTAAGAACGCCTTTGGATGGGCTGCCAGGGACACTTCTGGCGTT
CTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGAC
ATTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACTTGATCA
AAAATGAATGGGGCAATGCCATTTACCCAATCGTCCCCGGACATGAGATT
GTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGG
AGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCGCTCTTGTGATG
GCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTAT
GCCAGCAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGACAC
TATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCGCACCAC
TTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCG
TTGAGATTCTATGGGACTCGACAGCCTGGTATGCATGTGGGTGTTGTCGG
CTTGGGCGGTCTAGGCCATGTCGCTG
back to top