FC868899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_STAAB (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=mutS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 491 + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 591 LDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_STAA9 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain JH9) GN=mutS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 491 + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 591 LDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_STAA8 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain NCTC 8325) GN=mutS PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 491 + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 591 LDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_STAA2 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain JH1) GN=mutS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 491 + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 591 LDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_STAA1 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mutS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 491 + +T + +ITGPN GK+ ++ V + +MA+ G ++ E A +P FD +F IG + + DEIG GT+ +G AL +++E AE+ T+ +TH+ EL TL + +N + +E K Sbjct: 591 LDNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKE-AVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYK 741
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_SHEPA (DNA mismatch repair protein mutS OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=mutS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 41/150 (27.33%), Postives = 68/150 (45.33%), Query Frame = 3 Query: 27 PIFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACME 476 P+ + + ++L++TGPN GGK+ ++ V L +MA G ++ +E A + D +F IG + + NI DEIG GT+ +G +L S E A+ +T+ TH+ EL L EN ++ Sbjct: 604 PVTLNAQRKMLIVTGPNMGGKSTYMRQVALITLMAHIGCYV-PAEQAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLAKQLQAMTLFATHYFELTQLPEQLSNVENVHLD 752
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS_SHEON (DNA mismatch repair protein mutS OS=Shewanella oneidensis GN=mutS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 40/137 (29.20%), Postives = 63/137 (45.99%), Query Frame = 3 Query: 27 PIFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 437 P+ + + R+L++TGPN GGK+ ++ V L +MA G + +E A + D +F IG + + NI DEIG GT+ +G +L S E A+ +T+ TH+ EL L Sbjct: 604 PVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHIGCFV-PAERATIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYFELTQL 739 The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bpback to top |