FC868899

Overview
NameFC868899
Unique NameFC868899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:57..582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPN (MutS2 protein OS=Streptococcus pneumoniae GN=mutS2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            ++ GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPJ (MutS2 protein OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            ++ GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPI (MutS2 protein OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            ++ GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP7 (MutS2 protein OS=Streptococcus pneumoniae (strain 70585) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            ++ GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP2 (MutS2 protein OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            ++ GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_THETN (MutS2 protein OS=Thermoanaerobacter tengcongensis GN=mutS2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.177e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I IG++   LVITGPNTGGKT+ LKTVGL  +MA +G++I + E +++  F+ +F DIGDE            H+  I +I            DE+GAGT+PLEG+AL MS+L+    +G   TIATTH+ ELK         ENA +EFD   L+P Y+++ G+
Sbjct:  321 IHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSILKKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTG-CRTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRLIIGI 484          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRMU (MutS2 protein OS=Streptococcus mutans GN=mutS2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.177e-30
Identity = 74/159 (46.54%), Postives = 92/159 (57.86%), Query Frame = 3
Query:   48 TRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            T  ++ITGPNTGGKTI LKT+G+  +MA+SGL IL+ E +KV  F  +FADIGDE            H+  I  I            DE+GAGT+P EG AL MS+LE    S  + T+ TTH+ ELK      +F ENA MEFD V L P Y  + GV
Sbjct:  321 TTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFKDIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSILEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LACS1 (MutS2 protein OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.538e-30
Identity = 72/165 (43.64%), Postives = 98/165 (59.39%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I IG+  + +VITGPNTGGKTI LKT+GL  +M +SGL+I + E +++  FD +FADIGDE            H+  I  I            DE+GAGT+P EG AL +S+L+A    GS + +ATTH+ ELK   +      NA MEFD   L+P Y++L G+
Sbjct:  321 IMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSYV-VATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGI 484          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP4 (MutS2 protein OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.008e-30
Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +  GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+ + ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_EUBR3 (MutS2 protein OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.008e-30
Identity = 68/163 (41.72%), Postives = 98/163 (60.12%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G+  + L+ITGPNTGGKT+ LKTVGL  +M ++GLHI +++ +K+  F+ +FADIGDE            H+  I  I            DE+ +GT+P EG AL +S+L    + G+ +T+ATTH+ ELK    S D  ENAC EF+   L P Y++L G+
Sbjct:  323 LGEDYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQYGA-ITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGI 484          
The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MUTS2_STRPN6.903e-3143.64MutS2 protein OS=Streptococcus pneumoniae GN=mutS2... [more]
MUTS2_STRPJ6.903e-3143.64MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRPI6.903e-3143.64MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRP76.903e-3143.64MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRP26.903e-3143.64MutS2 protein OS=Streptococcus pneumoniae serotype... [more]
MUTS2_THETN1.177e-3043.03MutS2 protein OS=Thermoanaerobacter tengcongensis ... [more]
MUTS2_STRMU1.177e-3046.54MutS2 protein OS=Streptococcus mutans GN=mutS2 PE=... [more]
MUTS2_LACS11.538e-3043.64MutS2 protein OS=Lactobacillus salivarius subsp. s... [more]
MUTS2_STRP42.008e-3043.64MutS2 protein OS=Streptococcus pneumoniae serotype... [more]
MUTS2_EUBR32.008e-3041.72MutS2 protein OS=Eubacterium rectale (strain ATCC ... [more]

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Properties
Property NameValue
Genbank descriptionC31006C05EF AbioticL1 Citrus clementina cDNA clone C31006C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bp
GGATACTTGGAAAGCATTGCTTATTTCCTATTTTTATTGGTCAGAAAACA
AGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTATTTGCTT
AAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTCACATTT
TATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCACTTTTTGCTGAT
ATTGGTGATGAACAGTCCTTGTCACAATCTTTATTTTCCTTCTCTGGCCA
CTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAATCGTTGG
TGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGCACAGCG
CTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTTATTGAC
AATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACAGTAATG
ACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTAAAGCCA
GCTTACAAGATCCTTTGGGGAGTACC
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