FC868899

Overview
NameFC868899
Unique NameFC868899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:57..582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOBK (MutS2 protein OS=Clostridium botulinum (strain Okra / Type B1) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.008e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G++   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F+++FADIGDE            H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  321 LGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALKKEGVENASVEFDVETLRPTYRLLIGI 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRZT (MutS2 protein OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 72/165 (43.64%), Postives = 95/165 (57.58%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +  GQ    +VITGPNTGGKTI LKT+GL  +MA+SGL IL+   ++V  F+ +FADIGDE            H+  I +I            DE+GAGT+P EG AL M++LE       + T+ATTH+ ELK       F +NA MEFD   L+P Y+ + GV
Sbjct:  315 VHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADRGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRA5 (MutS2 protein OS=Streptococcus agalactiae serotype V GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 3
Query:   42 QKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            Q    +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+  F+++FADIGDE            H+  I +I            DE+GAGT+P EG +L M++LE    S ++ T+ATTH+ ELK      +F ENA MEFD   L P Y+ + GV
Sbjct:  319 QDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRA3 (MutS2 protein OS=Streptococcus agalactiae serotype III GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 3
Query:   42 QKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            Q    +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+  F+++FADIGDE            H+  I +I            DE+GAGT+P EG +L M++LE    S ++ T+ATTH+ ELK      +F ENA MEFD   L P Y+ + GV
Sbjct:  319 QDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRA1 (MutS2 protein OS=Streptococcus agalactiae serotype Ia GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 3
Query:   42 QKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            Q    +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+  F+++FADIGDE            H+  I +I            DE+GAGT+P EG +L M++LE    S ++ T+ATTH+ ELK      +F ENA MEFD   L P Y+ + GV
Sbjct:  319 QDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LACCB (MutS2 protein OS=Lactobacillus casei (strain BL23) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G K + +VITGPNTGGKTI LKT+GL  +M +SGL I + + +++  FD +FADIGDE            H+  I +I            DE+GAGT+P EG AL +++L+A  E G+ + +ATTH+ ELK   Y+     NA MEFD   L+P Y++L GV
Sbjct:  322 LGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGV 483          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LACC3 (MutS2 protein OS=Lactobacillus casei (strain ATCC 334) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G K + +VITGPNTGGKTI LKT+GL  +M +SGL I + + +++  FD +FADIGDE            H+  I +I            DE+GAGT+P EG AL +++L+A  E G+ + +ATTH+ ELK   Y+     NA MEFD   L+P Y++L GV
Sbjct:  322 LGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGV 483          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOBM (MutS2 protein OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G++   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F+++FADIGDE            H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  321 LGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGI 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOBL (MutS2 protein OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G++   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F+++FADIGDE            H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  321 LGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGI 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOBJ (MutS2 protein OS=Clostridium botulinum (strain Kyoto / Type A2) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G++   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F+++FADIGDE            H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  321 LGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGI 482          
The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MUTS2_CLOBK2.008e-3043.56MutS2 protein OS=Clostridium botulinum (strain Okr... [more]
MUTS2_STRZT2.623e-3043.64MutS2 protein OS=Streptococcus pneumoniae (strain ... [more]
MUTS2_STRA52.623e-3044.10MutS2 protein OS=Streptococcus agalactiae serotype... [more]
MUTS2_STRA32.623e-3044.10MutS2 protein OS=Streptococcus agalactiae serotype... [more]
MUTS2_STRA12.623e-3044.10MutS2 protein OS=Streptococcus agalactiae serotype... [more]
MUTS2_LACCB2.623e-3043.56MutS2 protein OS=Lactobacillus casei (strain BL23)... [more]
MUTS2_LACC32.623e-3043.56MutS2 protein OS=Lactobacillus casei (strain ATCC ... [more]
MUTS2_CLOBM2.623e-3043.56MutS2 protein OS=Clostridium botulinum (strain Loc... [more]
MUTS2_CLOBL2.623e-3043.56MutS2 protein OS=Clostridium botulinum (strain Lan... [more]
MUTS2_CLOBJ2.623e-3043.56MutS2 protein OS=Clostridium botulinum (strain Kyo... [more]

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Properties
Property NameValue
Genbank descriptionC31006C05EF AbioticL1 Citrus clementina cDNA clone C31006C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bp
GGATACTTGGAAAGCATTGCTTATTTCCTATTTTTATTGGTCAGAAAACA
AGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTATTTGCTT
AAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTCACATTT
TATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCACTTTTTGCTGAT
ATTGGTGATGAACAGTCCTTGTCACAATCTTTATTTTCCTTCTCTGGCCA
CTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAATCGTTGG
TGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGCACAGCG
CTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTTATTGAC
AATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACAGTAATG
ACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTAAAGCCA
GCTTACAAGATCCTTTGGGGAGTACC
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