FC868899

Overview
NameFC868899
Unique NameFC868899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:57..582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOB6 (MutS2 protein OS=Clostridium botulinum (strain 657 / Type Ba4) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G++   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F+++FADIGDE            H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  321 LGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGI 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOB1 (MutS2 protein OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G++   L+ITGPNTGGKT+ LKTVGL  +MA SGL I + E + + +F+++FADIGDE            H+K I  I            DE+GAGT+P EG AL +S+LE   + G+ + IATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  321 LGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGI 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOAB (MutS2 protein OS=Clostridium acetobutylicum GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 3
Query:    3 ILGKHCLFP--------IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            ++G+H L          I++G++   LVITGPNTGGKT+ LKT GL  +MA SGL I + E + + +F  ++ADIGDE            H+  I  I            DE+GAGT+P EG AL +S+LEA  + G+ + +ATTH+ ELK      +  ENA +EFD   L+P Y++L G+
Sbjct:  302 VMGRHPLIDPAKVVPLNIYMGREFTSLVITGPNTGGKTVTLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRIIDDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKI-VATTHYSELKAYALKTENVENASVEFDVETLRPTYRLLIGI 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BREBN (MutS2 protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30
Identity = 69/163 (42.33%), Postives = 97/163 (59.51%), Query Frame = 3
Query:   36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +G + + +V+TGPNTGGKT+ LKT+GL  +M  +GLHI + E +++  F S+FADIGDE            H+  I  I            DE+GAGT+P EG AL MS+++   +SG+ L +ATTH+ ELK   Y      NA +EFD   L+P Y++L GV
Sbjct:  323 LGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNIIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARL-VATTHYSELKAYAYDRPEVINASVEFDVQTLRPTYRLLIGV 484          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOBB (MutS2 protein OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 73/165 (44.24%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            + +G +   L+ITGPNTGGKT+ LKTVGL  +MA SGL I +S  + V +F  +FADIGDE            HL  I NI            DE+G GT+P EG AL ++++E  +  G+ L IATTH+ ELK    + D  ENA +EFD   L+P Y++L GV
Sbjct:  319 VVLGDEFDTLMITGPNTGGKTVTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIMEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKL-IATTHYSELKAYALNKDRVENASVEFDINTLRPTYRLLIGV 482          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACWK (MutS2 protein OS=Bacillus weihenstephanensis (strain KBAB4) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACHK (MutS2 protein OS=Bacillus thuringiensis subsp. konkukian GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACCZ (MutS2 protein OS=Bacillus cereus (strain ZK / E33L) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACCQ (MutS2 protein OS=Bacillus cereus (strain Q1) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACCN (MutS2 protein OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 72/165 (43.64%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   E +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IVLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVQEESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVHNRGARV-VATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLIGV 485          
The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MUTS2_CLOB62.623e-3043.56MutS2 protein OS=Clostridium botulinum (strain 657... [more]
MUTS2_CLOB12.623e-3043.56MutS2 protein OS=Clostridium botulinum (strain ATC... [more]
MUTS2_CLOAB2.623e-3040.11MutS2 protein OS=Clostridium acetobutylicum GN=mut... [more]
MUTS2_BREBN2.623e-3042.33MutS2 protein OS=Brevibacillus brevis (strain 47 /... [more]
MUTS2_CLOBB3.426e-3044.24MutS2 protein OS=Clostridium botulinum (strain Ekl... [more]
MUTS2_BACWK3.426e-3043.03MutS2 protein OS=Bacillus weihenstephanensis (stra... [more]
MUTS2_BACHK3.426e-3043.03MutS2 protein OS=Bacillus thuringiensis subsp. kon... [more]
MUTS2_BACCZ3.426e-3043.03MutS2 protein OS=Bacillus cereus (strain ZK / E33L... [more]
MUTS2_BACCQ3.426e-3043.03MutS2 protein OS=Bacillus cereus (strain Q1) GN=mu... [more]
MUTS2_BACCN3.426e-3043.64MutS2 protein OS=Bacillus cereus subsp. cytotoxis ... [more]

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Properties
Property NameValue
Genbank descriptionC31006C05EF AbioticL1 Citrus clementina cDNA clone C31006C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bp
GGATACTTGGAAAGCATTGCTTATTTCCTATTTTTATTGGTCAGAAAACA
AGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTATTTGCTT
AAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTCACATTT
TATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCACTTTTTGCTGAT
ATTGGTGATGAACAGTCCTTGTCACAATCTTTATTTTCCTTCTCTGGCCA
CTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAATCGTTGG
TGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGCACAGCG
CTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTTATTGAC
AATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACAGTAATG
ACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTAAAGCCA
GCTTACAAGATCCTTTGGGGAGTACC
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