FC868899

Overview
NameFC868899
Unique NameFC868899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:57..582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC7 (MutS2 protein OS=Bacillus cereus (strain AH187) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC4 (MutS2 protein OS=Bacillus cereus (strain B4264) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC3 (MutS2 protein OS=Bacillus cereus (strain 03BB102) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC2 (MutS2 protein OS=Bacillus cereus (strain G9842) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC1 (MutS2 protein OS=Bacillus cereus (strain ATCC 10987) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACC0 (MutS2 protein OS=Bacillus cereus (strain AH820) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACAH (MutS2 protein OS=Bacillus thuringiensis (strain Al Hakam) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.426e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I +G+    +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI   + +++  F ++FADIGDE            H+  I +I            DE+GAGT+P EG AL +S+L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGV 485
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRS7 (MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 3 
Query:   54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V  F+ ++ADIGDE            H+  I  I            DE+GAGT+P EG +L M++LE    + ++ T+ATTH+ ELK       + ENA M FD V LKP Y+ + GV
Sbjct:  323 VIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGV 478
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STREM (MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 3 
Query:   54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V  F+ ++ADIGDE            H+  I  I            DE+GAGT+P EG +L M++LE    + ++ T+ATTH+ ELK       + ENA M FD V LKP Y+ + GV
Sbjct:  323 VIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGV 478
[Close]
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRE4 (MutS2 protein OS=Streptococcus equi subsp. equi (strain 4047) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 3 
Query:   54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V  F+ ++ADIGDE            H+  I  I            DE+GAGT+P EG +L M++LE    + ++ T+ATTH+ ELK       + ENA M FD V LKP Y+ + GV
Sbjct:  323 VIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGV 478
The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MUTS2_BACC73.426e-3043.03MutS2 protein OS=Bacillus cereus (strain AH187) GN... [more]
MUTS2_BACC43.426e-3043.03MutS2 protein OS=Bacillus cereus (strain B4264) GN... [more]
MUTS2_BACC33.426e-3043.03MutS2 protein OS=Bacillus cereus (strain 03BB102) ... [more]
MUTS2_BACC23.426e-3043.03MutS2 protein OS=Bacillus cereus (strain G9842) GN... [more]
MUTS2_BACC13.426e-3043.03MutS2 protein OS=Bacillus cereus (strain ATCC 1098... [more]
MUTS2_BACC03.426e-3043.03MutS2 protein OS=Bacillus cereus (strain AH820) GN... [more]
MUTS2_BACAH3.426e-3043.03MutS2 protein OS=Bacillus thuringiensis (strain Al... [more]
MUTS2_STRS74.474e-3045.22MutS2 protein OS=Streptococcus equi subsp. zooepid... [more]
MUTS2_STREM4.474e-3045.22MutS2 protein OS=Streptococcus equi subsp. zooepid... [more]
MUTS2_STRE44.474e-3045.22MutS2 protein OS=Streptococcus equi subsp. equi (s... [more]

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Properties
Property NameValue
Genbank descriptionC31006C05EF AbioticL1 Citrus clementina cDNA clone C31006C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bp
GGATACTTGGAAAGCATTGCTTATTTCCTATTTTTATTGGTCAGAAAACA
AGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTATTTGCTT
AAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTCACATTT
TATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCACTTTTTGCTGAT
ATTGGTGATGAACAGTCCTTGTCACAATCTTTATTTTCCTTCTCTGGCCA
CTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAATCGTTGG
TGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGCACAGCG
CTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTTATTGAC
AATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACAGTAATG
ACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTAAAGCCA
GCTTACAAGATCCTTTGGGGAGTACC
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