FC868899

Overview
NameFC868899
Unique NameFC868899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9415 contig Ccv1_Contig9415:57..582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_FINM2 (MutS2 protein OS=Finegoldia magna (strain ATCC 29328) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.474e-30
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I++G     LVITGPNTGGKT+ LKTVGL  +MA+SG+ I   E ++V  FD++F DIGDE            H+K I +I            DE+GAGT+P EG AL +++L  F    S+ TIATTH+ +LK    +  + +N  +EFD   L P YK+  G+
Sbjct:  320 IYLGDDYNTLVITGPNTGGKTVTLKTVGLITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLVLFDELGAGTDPTEGAALAIAILRIFLYK-SIRTIATTHYSQLKIFALTEKYVKNGSVEFDVNTLSPTYKLRIGI 483          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STACT (MutS2 protein OS=Staphylococcus carnosus (strain TM300) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.844e-30
Identity = 71/165 (43.03%), Postives = 100/165 (60.61%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I   +  + ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +K+  FD+++ DIGDE            H+K I  I            DE+GAGT+P EG AL MS+L+   + GSL+ +ATTH+ ELK   Y+ +   NA +EFD   L P YK+L GV
Sbjct:  323 IEFAEDIQTVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVFDNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSLILFDELGAGTDPSEGAALAMSILDHVQKLGSLV-MATTHYPELKAYSYNREGVMNASVEFDVNILSPTYKLLMGV 486          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOPH (MutS2 protein OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.844e-30
Identity = 68/165 (41.21%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            I+ G K  +LVITGPNTGGKT+ LKTVGL  +M ++GLHI + + +++  F+ ++ADIGDE            H+    +I            DE+GAGT+P EG AL M++L ++     + T+ATTH+ ELK    S D   NAC EF    L+P Y++L G+
Sbjct:  326 IYFGDKFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSILEHANENSLVLFDELGAGTDPTEGAALAMAIL-SYLHQRKIRTMATTHYSELKIFALSTDGVSNACCEFSVETLQPTYRLLIGI 489          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACHD (MutS2 protein OS=Bacillus halodurans GN=mutS2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.844e-30
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 3
Query:    9 GKHCLFP--------IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            G+H L P        I +G     LVITGPNTGGKT+ LKT+GL  +MA+SGLH+ + E +++  F  +FADIGDE            H+  I +I            DE+GAGT+P EG AL +++L+     G+ + +ATTH+ ELK   Y+ +   NA +EFD   L P Y++L GV
Sbjct:  307 GRHPLIPDDEIVPIDIELGHSYSSLVITGPNTGGKTVTLKTIGLLTLMAQSGLHVPAEEESELAVFKHVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDHESLVLFDELGAGTDPTEGAALAIAILDDVYRRGARI-VATTHYSELKGYAYNREGVMNASVEFDVETLSPTYRLLIGV 485          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRTD (MutS2 protein OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30
Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 3
Query:   54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V  F  +FADIGDE            H+  I  I            DE+GAGT+P EG +L M++LE    S  + T+ATTH+ ELK         ENA MEFD   L+P Y+ + GV
Sbjct:  323 VIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRT2 (MutS2 protein OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30
Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 3
Query:   54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V  F  +FADIGDE            H+  I  I            DE+GAGT+P EG +L M++LE    S  + T+ATTH+ ELK         ENA MEFD   L+P Y+ + GV
Sbjct:  323 VIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRT1 (MutS2 protein OS=Streptococcus thermophilus (strain CNRZ 1066) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30
Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 3
Query:   54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V  F  +FADIGDE            H+  I  I            DE+GAGT+P EG +L M++LE    S  + T+ATTH+ ELK         ENA MEFD   L+P Y+ + GV
Sbjct:  323 VIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPZ (MutS2 protein OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 3
Query:   57 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+  F+++FADIGDE            H+  I +I            DE+GAGT+P EG +L M++LE    S  + T+ATTH+ ELK      +F ENA MEFD   L P Y+ + GV
Sbjct:  324 IVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRPG (MutS2 protein OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 3
Query:   57 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+  F+++FADIGDE            H+  I +I            DE+GAGT+P EG +L M++LE    S  + T+ATTH+ ELK      +F ENA MEFD   L P Y+ + GV
Sbjct:  324 IVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478          
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP8 (MutS2 protein OS=Streptococcus pyogenes serotype M18 GN=mutS2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 3
Query:   57 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524
            +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+  F+++FADIGDE            H+  I +I            DE+GAGT+P EG +L M++LE    S  + T+ATTH+ ELK      +F ENA MEFD   L P Y+ + GV
Sbjct:  324 IVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478          
The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MUTS2_FINM24.474e-3042.42MutS2 protein OS=Finegoldia magna (strain ATCC 293... [more]
MUTS2_STACT5.844e-3043.03MutS2 protein OS=Staphylococcus carnosus (strain T... [more]
MUTS2_CLOPH5.844e-3041.21MutS2 protein OS=Clostridium phytofermentans (stra... [more]
MUTS2_BACHD5.844e-3040.56MutS2 protein OS=Bacillus halodurans GN=mutS2 PE=3... [more]
MUTS2_STRTD7.632e-3045.22MutS2 protein OS=Streptococcus thermophilus (strai... [more]
MUTS2_STRT27.632e-3045.22MutS2 protein OS=Streptococcus thermophilus (strai... [more]
MUTS2_STRT17.632e-3045.22MutS2 protein OS=Streptococcus thermophilus (strai... [more]
MUTS2_STRPZ7.632e-3044.87MutS2 protein OS=Streptococcus pyogenes serotype M... [more]
MUTS2_STRPG7.632e-3044.87MutS2 protein OS=Streptococcus pyogenes serotype M... [more]
MUTS2_STRP87.632e-3044.87MutS2 protein OS=Streptococcus pyogenes serotype M... [more]

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Properties
Property NameValue
Genbank descriptionC31006C05EF AbioticL1 Citrus clementina cDNA clone C31006C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bp
GGATACTTGGAAAGCATTGCTTATTTCCTATTTTTATTGGTCAGAAAACA
AGAGTTCTTGTCATAACTGGCCCCAACACTGGAGGAAAAACTATTTGCTT
AAAGACAGTGGGATTGGCAGTTATGATGGCCAAATCAGGCCTTCACATTT
TATCTTCAGAATATGCAAAGGTTCCTTGGTTTGATTCACTTTTTGCTGAT
ATTGGTGATGAACAGTCCTTGTCACAATCTTTATTTTCCTTCTCTGGCCA
CTTGAAACAAATAGGTAACATATTATCACAGTCGACAAGCCAATCGTTGG
TGCTACTTGATGAAATTGGTGCGGGGACAAATCCCCTTGAAGGCACAGCG
CTTGGGATGTCACTGCTGGAAGCATTTGCTGAAAGTGGTTCTTTATTGAC
AATAGCTACAACACATCATGGTGAACTTAAAACACTGAAGTACAGTAATG
ACTTCTTCGAGAATGCTTGTATGGAGTTCGATGAAGTTAAATTAAAGCCA
GCTTACAAGATCCTTTGGGGAGTACC
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