FC868899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRP1 (MutS2 protein OS=Streptococcus pyogenes serotype M1 GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30 Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 57 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+++FADIGDE H+ I +I DE+GAGT+P EG +L M++LE S + T+ATTH+ ELK +F ENA MEFD L P Y+ + GV Sbjct: 324 IVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAILEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGV 478
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LISW6 (MutS2 protein OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30 Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++G+ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+ +FADIGDE H+ I +I DE+GAGT+P EG AL +++L+A E G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GV Sbjct: 322 IYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNHKSLILYDELGAGTDPQEGAALAIAILDASHEKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LISMO (MutS2 protein OS=Listeria monocytogenes GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.632e-30 Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++G+ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+ +FADIGDE H+ I +I DE+GAGT+P EG AL +++L+A E G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GV Sbjct: 322 IYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNQKSLILYDELGAGTDPQEGAALAIAILDASHEKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LISIN (MutS2 protein OS=Listeria innocua GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.968e-30 Identity = 70/165 (42.42%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++G+ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+++FADIGDE H+ I +I DE+GAGT+P EG AL +++L+A + G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GV Sbjct: 322 IYLGEDFSTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFENVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNHKSLILYDELGAGTDPQEGAALAIAILDASHKKGASV-VATTHYPELKAYGYNRAHATNASVEFNVETLSPTYKLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOD6 (MutS2 protein OS=Clostridium difficile (strain 630) GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.968e-30 Identity = 71/165 (43.03%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++G+ LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D++FADIGDE H+ I +I DE+GAGT+P+EG AL +++LE G+ IATTH+ ELK + ENA +EFD L P YK+L GV Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVGA-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOBA (MutS2 protein OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.968e-30 Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 + +G + L+ITGPNTGGKT+ LKTVGL +MA SGL I +S + V +F +FADIGDE HL I NI DE+G GT+P EG AL ++++E + G+ L IATTH+ ELK + + ENA +EFD L+P Y++L GV Sbjct: 319 VVLGDEFDTLMITGPNTGGKTVTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIMEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKL-IATTHYSELKAYALNKERVENASVEFDINTLRPTYRLLIGV 482
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACA2 (MutS2 protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.968e-30 Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I +G +VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD++FADIGDE H+ I NI DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y+ NA +EFD L P YK+L GV Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRGC (MutS2 protein OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.302e-29 Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 + G +VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F +FADIGDE H+ I +I DE+GAGT+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+P Y+ + GV Sbjct: 315 LHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAGTDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFMQGV 478
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STAS1 (MutS2 protein OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.302e-29 Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I Q ++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++++ DIGDE H+K I I DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GV Sbjct: 323 IEFAQDIETVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGV 486
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACAN (MutS2 protein OS=Bacillus anthracis GN=mutS2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.302e-29 Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I +G+ +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FADIGDE H+ I +I DE+GAGT+P EG AL +S+L+ G+ + +ATTH+ ELK Y+ + NA +EFD L P +K+L GV Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLIGV 485 The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bpback to top |