FC868899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LISMC (MutS2 protein OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=mutS2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.788e-29 Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++G+ +VITGPNTGGKTI LKT+GL +MA+SGL I + E + + F+ +FADIGDE H+ I +I DE+GAGT+P EG AL +++L+A G+ + +ATTH+ ELK Y+ NA +EF+ L P YK+L GV Sbjct: 322 IYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILGNVNQKSLILYDELGAGTDPQEGAALAIAILDASHAKGASV-VATTHYPELKAYGYNRVHATNASVEFNVETLSPTYKLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STAEQ (MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mutS2 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 4.947e-29 Identity = 68/156 (43.59%), Postives = 96/156 (61.54%), Query Frame = 3 Query: 57 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++++ DIGDE H+K I I DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GV Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGV 486
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STAES (MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mutS2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.461e-29 Identity = 68/156 (43.59%), Postives = 96/156 (61.54%), Query Frame = 3 Query: 57 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++++ DIGDE H+K I I DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y+ + NA +EFD L P YK+L GV Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGV 486
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LEUMM (MutS2 protein OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=mutS2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.461e-29 Identity = 69/165 (41.82%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I +G + ++ITGPNTGGKTI +KT+GL +MA+SGL I + + + + FD +FADIGDE H+ I ++ DE+GAGT+P EG AL +++L+ A G+ TIATTH+ ELK Y+ +NA M FD L+P Y+ L GV Sbjct: 323 ISLGDSYKTIIITGPNTGGKTITIKTLGLLQLMAQSGLFITTRQPSTIGIFDEVFADIGDEQSIEQNLSTFSSHMANIVSMLDHIDDKTLVIFDELGAGTDPAEGAALAIAILDKVASLGA-YTIATTHYPELKLYGYNRPETKNASMVFDVETLQPTYQFLMGV 486
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_GEMAT (MutS2 protein OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=mutS2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.461e-29 Identity = 67/167 (40.12%), Postives = 97/167 (58.08%), Query Frame = 3 Query: 24 FPIFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 F + + R ++++GPNTGGKT+ LK +GL MMA+ G+ E +++ FD L+AD+GDE HLK +G I DE+G+GT+P EG ALG ++LE G+ LT+ATTH G+LK L + NA ++FD V+L P Y++L GV Sbjct: 324 FDLTLHAGERTMLVSGPNTGGKTVLLKAIGLISMMAQCGVPAPLGETSQLAVFDDLYADVGDEQSIEASLSTFSAHLKNLGEILRSATTSSLVLIDELGSGTDPAEGAALGGAILETLTRRGT-LTLATTHLGQLKLLATDVEGVVNASLQFDAVQLAPTYRLLKGV 489
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLONN (MutS2 protein OS=Clostridium novyi (strain NT) GN=mutS2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.461e-29 Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++ +VITGPNTGGKT+ LKTVGL +MA SGL I +S+ + + +F +FADIGDE H+ I NI DE+GAGT+P EG AL +S+LE + + + IATTH+ ELK D ENA +EFD L+P Y++L GV Sbjct: 319 IYLRDGITSVVITGPNTGGKTVTLKTVGLLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSADENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKV-IATTHYSELKAYALKVDNVENASVEFDVETLRPTYRLLIGV 482
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_LACPL (MutS2 protein OS=Lactobacillus plantarum GN=mutS2 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.438e-29 Identity = 69/165 (41.82%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I +G + +VITGPNTGGKTI LKT+GL +MA+SGL I ++V ++ +FADIGDE H++ I + DE+GAGT+P EG AL +++L+A G+ + +ATTH+ ELK ++ NA MEFDE LKP Y++L G+ Sbjct: 323 ISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGTDPQEGAALAIAILDAIGAKGTQV-VATTHYPELKAYGFNRPDTINASMEFDEETLKPTYRLLVGI 486
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_THERP (MutS2 protein OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=mutS2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.439e-28 Identity = 69/163 (42.33%), Postives = 95/163 (58.28%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 +G++ R+LVITGPNTGGKT+ LKTVGL +MA++GL I ++ + + F ++F DIGDE H+++I DEI AGT+P EG AL ++LE E G+ L I TTH+ ELK ENA +EFD V L P Y++L G+ Sbjct: 333 LGERFRILVITGPNTGGKTVALKTVGLLALMAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRRIVATLQQADASSLVLLDEIAAGTDPQEGAALARAILERLLEIGA-LGIVTTHYPELKVFATGTPGLENASVEFDPVTLSPTYRLLVGL 494
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_PEDPA (MutS2 protein OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=mutS2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.439e-28 Identity = 71/165 (43.03%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I +G + LVITGPNTGGKTI LKTVGL +MA+SG+ I ++E + V F+ +FADIGDE H+ I DE+GAGT+P EG AL +++L+ +G+ +++ TTH+ ELKT Y NA MEFD L+P YK+L G+ Sbjct: 321 IRLGGEYETLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRIFEEIFADIGDEQSIEQNLSTFSSHMDNTIRILGNLNERSLALFDELGAGTDPKEGAALAIAILDKVRSTGA-VSMTTTHYPELKTYGYERMGTINASMEFDVDTLQPTYKLLLGI 484
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOPS (MutS2 protein OS=Clostridium perfringens (strain SM101 / Type A) GN=mutS2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.439e-28 Identity = 68/165 (41.21%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I++G++ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE H+ I I DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK + ENA +EF+ L+P Y++L GV Sbjct: 319 IYLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGV 482 The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bpback to top |