FC868905

Overview
NameFC868905
Unique NameFC868905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868905 vs. ExPASy Swiss-Prot
Match: ODO2_BACSU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bacillus subtilis GN=odhB PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 34/84 (40.48%), Postives = 58/84 (69.05%), Query Frame = 1 
Query:  397 LVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIXK-SGEGVA 645
            + +  VP + ESI++GT+A++LK PGD VE  E + ++ETDKV +++ + E+GV++E++   G+TV+ G  I  I + +GE  A
Sbjct:    1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLKDSGDTVQVGEIIGTISEGAGESSA 84
[Close]
BLAST of FC868905 vs. ExPASy Swiss-Prot
Match: ODO2_RICBR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=sucB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 
Query:  400 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIXKSGEGVA 645
            V  +VP +GES+T+ T+AK+ K  GD V+ DE + +IET+KVT++V SP  G I +++  +G  V  G +I  I   GE VA
Sbjct:    3 VKIIVPSLGESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKADGANVAVGEEIGDI-NEGEAVA 83
The following BLAST results are available for this feature:
BLAST of FC868905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ODO2_BACSU2.564e-1140.48Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICBR5.713e-1143.90Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionC31006D02EF AbioticL1 Citrus clementina cDNA clone C31006D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868905 ID=FC868905; Name=FC868905; organism=Citrus clementina; type=EST; length=658bp
GACAAAAACAATCATTCATTCAACCCTGTTGTGTTCGTCTGAAGACTCTC
TCAAAGAAAACGCAACTTGTTCTGTTCGATCAAGCAGGTACATACCTGAA
CAACGATGCTGGGTGTTATACGGAGAAGGGTCGCGAGTGGAGGCTCGCCT
GCTTCGATTTTAGGGCATTCACTGCAGACAATGAGGCCTGCAATGTCTGT
ATCTAGAGTCTCATCTATTGCAGGAAAAGAGACGTTACTGCATTCAAGAG
GATTAGGGCATATCCGGAATTTCAGTCATTTAATTTTTCCAGGTTGCTCT
AAGGGTTGTCAACCATTAAGGGATGTAATTTCTAGCACCCAGAAAGCAAC
TAACATGCATCTGTGGAGCCATCCATTTTCTTCTGAAGGAGGGGATTTGG
TTGATGCTGTTGTCCCTTTTATGGGTGAATCCATAACCGATGGTACTTTG
GCAAAATTCTTGAAGGGTCCTGGTGATAGGGTGGAACTTGATGAACCAAT
TGCTCAAATTGAAACCGATAAGGTAACGATTGATGTTGCAAGTCCGGAAG
CAGGTGTTATCAAAGAGCTTGTAGCCAAAGAAGGGGAGACTGTGGAACCA
GGTACCAAGATTGCTGTGATTTNCAAGTCTGGTGAAGGTGTAGCTCATGT
AGCTCCCT
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