FC868907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 55/196 (28.06%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 86 LVIDNGSGMCKAGFAGD-DAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRY--PIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTG--IVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAERGY 658 +++DNGS K+ GD + P A+ I GR K YVG + + +L + P E G + NWD + +W + FYN + +LLT+ P+ + Q+VFE + ++ + A L ++SG+ +V+D+G THV P+ G I RV++ G+ +T+ L + ++ R Y Sbjct: 1 MILDNGSYAIKSDRTGDAETPNAL---IRGR-----------DKTVYVGQDLTKCKDYASLVFKRPSEKGQLINWDIQKAVWDNLFYNPQTGVDTDSSLLLTQYPLTLPQVSANIDQVVFEEYGFEQYHRTEAANLVAWSSGQCLDACLVVDAGFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLLKETVSFRHY 182
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 49/193 (25.39%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 74 EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAER 652 E A+VID G K GFAG+ PR + PS++ R A + I ++Y I + ++ +++ H ++ L V P + +++ E+ + P RE +T+++F+ F P+ ++ +++L G + +VLD G + V+PIYEG + + + + G+ L L L E+ Sbjct: 12 EKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMSKPIKVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKELETQLLEQ 182
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 51/204 (25.00%), Postives = 97/204 (47.55%), Query Frame = 2 Query: 74 EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAERGYTFSTTAERE 685 E A+VID G K GFAG+ PR + PS++ R A + + ++Y I + ++ +++ H ++ L V P + +++ E+ + P RE +T+++F+ F P+ ++ +++L G + +VLD G + V+PIYEG + + + + G+ L L L E+ T T+ +E Sbjct: 12 EKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMPKPVRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQ-CTVDTSVAKE 192
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 52/204 (25.49%), Postives = 97/204 (47.55%), Query Frame = 2 Query: 74 EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAERGYTFSTTAERE 685 E A+VID G K GFAG+ PR + PS++ + A + I ++Y I + ++ +++ H ++ L V P + +++ E+ + P RE +T+++F+ F P+ ++ +++L G + +VLD G + V+PIYEG + + + + G+ L L L E+ T T A +E Sbjct: 12 EKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQ-CTVDTGAAKE 192
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 54/198 (27.27%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 77 VAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNEL-RVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTG-----IVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAER 652 + LV+DNG+ K G++ D +V P+ R + + + DE + G+ + P + G + NWD ++W + F E+ +V + I++TE N S +E M +I+FE + A LS + R I++DSG TH+VP AI R+++ G+ LT++L +I++ R Sbjct: 1 MTTLVLDNGAYNAKIGYSHDSV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR 191
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 55/198 (27.78%), Postives = 95/198 (47.98%), Query Frame = 2 Query: 77 VAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNEL-RVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTG-----IVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAER 652 +A LV+DNG+ K G++ A +V P+ R + + + DE + G+ + P + G + NWD ++W + F E+ +V + I++TE N S +E M +I+FE + A LS + R I++DSG TH+VP AI R+++ G+ LT++L +I++ R Sbjct: 1 MATLVLDNGAYNAKIGYS--HAHVSVIPNCQFRSKTARLKTFTANQL----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFVDTNIIITEPYFNFSSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR 191
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 54/209 (25.84%), Postives = 92/209 (44.02%), Query Frame = 2 Query: 86 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEH--GVVTNWDDMEKIWHHTFYNELRVAPE--EHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTG--------------IVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAERGY 658 +V+DNG+ KAGFAG P+ + R + + ++G+E + TL++ H G + +W +W N + P ++ +LLT+ S Q+VFE F A+ A L + G T +V+DSG TH++P+ + A+ RVD+ G+ LT+YL ++++ R Y Sbjct: 8 IVLDNGAYHIKAGFAGGKVVE--IPNCLTRSKDGNRL--------FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKY 206
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 53/198 (26.77%), Postives = 95/198 (47.98%), Query Frame = 2 Query: 77 VAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNEL-RVAPEEHPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTG-----IVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAER 652 + LV+DNG+ K G++ ++ +V P+ R + + + DE + G+ + P + G + NWD ++W + F E+ +V + I++TE N S +E M +I+FE + A LS + R I++DSG TH+VP AI R+++ G+ LT++L +I++ R Sbjct: 1 MTTLVLDNGAYNAKIGYSHENV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR 191
BLAST of FC868907 vs. ExPASy Swiss-Prot
Match: ARP9_SCHPO (SWI/SNF and RSC complexes subunit arp9 OS=Schizosaccharomyces pombe GN=arp9 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 40/140 (28.57%), Postives = 69/140 (49.29%), Query Frame = 2 Query: 272 PIEHGVVTNWDDMEKIWHHTFYNELRVAPEE----HPILLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAERGYTFSTTAE 679 PI+ G V +W+ ++ W H Y+ L P + +P+ L +RE TQ FE P F ++ + ++ LYA G G+V+D G T + PI +G + A ++ + GR +T +L +L E T ++ + Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYMTQHLQNLLRESLPTLKSSGQ 251 The following BLAST results are available for this feature:
BLAST of FC868907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 479
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868907 ID=FC868907; Name=FC868907; organism=Citrus clementina; type=EST; length=697bpback to top |