FC868918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_ANASP (50S ribosomal protein L15 OS=Anabaena sp. (strain PCC 7120) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 RLN++ PQ GS I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ + K P KILG+G+ Sbjct: 2 RLNDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRAAGILTAA----KGPLKILGNGD 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_PROMS (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain AS9601) GN=rplO PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K P KILG+G+ Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGK 119
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 60/124 (48.39%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL ++ F + D V+L++L KKGLI + K P KILG+G+ Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLI----FKPKFPLKILGNGK 119
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_PROM2 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplO PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K P KILG+G+ Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGK 119
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNJB (50S ribosomal protein L15 OS=Synechococcus sp. GN=rplO PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 57/125 (45.60%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 RL ++ PQ GS ++AGQG SCG GMRGQK+R G R GFEGGQ PLYRR+PKL+ + +Y VNL+ + A G EVSLE+L ++G++ + P KILGDGE Sbjct: 2 RLEDIRPQAGSTRRRRRLGRGVSAGQGASCGKGMRGQKARKGGSTRPGFEGGQTPLYRRLPKLKHFP--RYRRRLEYTLVNLRAL--ADLPAGSEVSLESLMERGIVTTNDG----PLKILGDGE 118
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNY3 (50S ribosomal protein L15 OS=Synechocystis sp. (strain PCC 6803) GN=rplO PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 56/127 (44.09%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDI---EAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 L+ L P+ G+ IAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ P Y P + + + AG V+LE+L + G++ + P K+LG+GE Sbjct: 3 LSELSPKDGAKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRLPKLK--------HFPLYNPKHFTVVNVGKLAGLAPNTVVTLESLMEAGIVTSNDG----PLKVLGNGE 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 57/125 (45.60%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 RLN++ PQ GS I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ K P K+LG+G+ Sbjct: 2 RLNDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGD 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNS3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9311) GN=rplO PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 RL +L P G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A ++ G V+L++L K G++ K P KILG+GE Sbjct: 4 RLESLKPNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFTLVNPKSFTVLNVSALNEIKAGSTVNLDSLVKDGIVT----SPKSPLKILGNGE 119
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_PROMA (50S ribosomal protein L15 OS=Prochlorococcus marinus GN=rplO PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPFKILGDG 655 L++L P G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L L ++ + L EG V+L++L K G++ K P K+LG+G Sbjct: 6 LDSLKPNKGARKRKTRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNSKSFTLINVASLNSLKEGSTVNLDSLVKTGIVT----SPKYPLKVLGNG 119
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNPW (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH7803) GN=rplO PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 59/126 (46.83%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 RL +L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L+ G VSL++L K G++ K P KILG+GE Sbjct: 4 RLESLKSNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKQFTVVNVSALNDLKAGSTVSLDSLVKDGIVT----SPKHPLKILGNGE 119 The following BLAST results are available for this feature:
BLAST of FC868918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868918 ID=FC868918; Name=FC868918; organism=Citrus clementina; type=EST; length=698bpback to top |