FC868918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_BURP1 (50S ribosomal protein L15 OS=Burkholderia pseudomallei (strain 1710b) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKL 631 LNNL P G+ I +G G + G G +GQKSRSG + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ + K+ Sbjct: 3 LNNLKPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLGDLEK---LPVDEIDLLALKQAGLVGELIKSAKI 110
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_BURP0 (50S ribosomal protein L15 OS=Burkholderia pseudomallei (strain 1106a) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKL 631 LNNL P G+ I +G G + G G +GQKSRSG + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ + K+ Sbjct: 3 LNNLKPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLGDLEK---LPVDEIDLLALKQAGLVGELIKSAKI 110
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_BURMS (50S ribosomal protein L15 OS=Burkholderia mallei (strain SAVP1) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKL 631 LNNL P G+ I +G G + G G +GQKSRSG + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ + K+ Sbjct: 3 LNNLKPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLGDLEK---LPVDEIDLLALKQAGLVGELIKSAKI 110
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_BURMA (50S ribosomal protein L15 OS=Burkholderia mallei GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKL 631 LNNL P G+ I +G G + G G +GQKSRSG + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ + K+ Sbjct: 3 LNNLKPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLGDLEK---LPVDEIDLLALKQAGLVGELIKSAKI 110
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_BURM9 (50S ribosomal protein L15 OS=Burkholderia mallei (strain NCTC 10229) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKL 631 LNNL P G+ I +G G + G G +GQKSRSG + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ + K+ Sbjct: 3 LNNLKPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLGDLEK---LPVDEIDLLALKQAGLVGELIKSAKI 110
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_BURM7 (50S ribosomal protein L15 OS=Burkholderia mallei (strain NCTC 10247) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYV-PVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKL 631 LNNL P G+ I +G G + G G +GQKSRSG + GFEGGQMPL RR+PK G + ++V V L D+E L DE+ L LK+ GL+ + K+ Sbjct: 3 LNNLKPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPK-----RGFTSLTKEFVGEVRLGDLEK---LPVDEIDLLALKQAGLVGELIKSAKI 110
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_ALKMQ (50S ribosomal protein L15 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 48/124 (38.71%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDG 655 +L+ L P G+ A G G + G G GQ SRSG GVR GFEGGQMPL RR+PK G + Y VN+ + F +G ++ E LK+ G+I + K KILG+G Sbjct: 2 KLHELKPAKGAVKEVKRKGRGRATGNGKTAGRGHNGQNSRSGGGVRIGFEGGQMPLARRLPK----RGFTNIFAKVYNEVNVDVLNK--FEDGTTITPEFLKEMGVIK---QIEKNGVKILGNG 116
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_AERHH (50S ribosomal protein L15 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplO PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/108 (42.59%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPG-VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLI 604 RLN L P GS I +G G + G G++GQ SRSG G VR GFEGGQMPL R+PK G V L +I +EGD V + TLK+ G+I Sbjct: 2 RLNTLSPAAGSKRVKHRPGRGIGSGLGKTGGRGVKGQTSRSGGGKVRNGFEGGQMPLKIRLPKF----GFFSRKSLVSAEVRLNEI---ALVEGDVVDVSTLKQAGVI 102 The following BLAST results are available for this feature:
BLAST of FC868918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868918 ID=FC868918; Name=FC868918; organism=Citrus clementina; type=EST; length=698bpback to top |