FC868922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNE7 (Ycf48-like protein OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1178 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27 Identity = 60/128 (46.88%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 305 SAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIY 688 S W+ + + + +LDIAF + HG+L+GT L ET DGG++W+ R++ + D YR NSISFKG EGW+VG+P+++LHT+D G++W RIPLS +LPG + + A G+ AEM TD AIY Sbjct: 40 SPWQVIDLGTEK--TILDIAFTSNK-QHGWLVGTDLALYETLDGGQSWSERAL----DLDETYRLNSISFKGDEGWVVGQPSLMLHTTDGGKNWLRIPLSEKLPGSPLLVTALGKGEAEMATDVAAIY 160
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_PROMA (Ycf48-like protein OS=Prochlorococcus marinus GN=Pro_0327 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 63/133 (47.37%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 296 EALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 ++ S WE + + D LDIAFV D NHGFL+G + +LET DGG TW R + EE N+R SI FK EGWIVG+P ++LH+ DAG++W R+ L SQLPG+ I SAE+ T GA+Y T Sbjct: 33 QSSSPWEEIELANDDNP--LDIAFVDD--NHGFLVGANRLILETTDGGSTWEERDLDIPAEE--NFRLMSIDFKEDEGWIVGQPNLVLHSEDAGKNWTRLSLGSQLPGNPYLITTLDTSSAELATTAGAVYRT 159
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNPX (Ycf48-like protein OS=Synechococcus sp. (strain WH8102) GN=SYNW0205 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 65/162 (40.12%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 209 QFVSQTATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 +FVS L L + L + + S W+ + + + LD+AF D HG+L+G+ + + ET DGG TW RS+ EEE N+R SI F G EGWI G+P +L+HTSD G++W R+ L ++LPG+ I A G SAEM T+ GA+Y T Sbjct: 3 RFVSSAINLLLVLVLGVSLSGCVTTRLPVASTSPWQALNLDTEANP--LDVAFT--DSRHGYLVGSNRMIRETNDGGATWNDRSLDLPEEE--NFRLISIDFNGDEGWIAGQPGLLMHTSDGGQNWTRLFLDTKLPGEPYLITALGSHSAEMATNVGAVYET 158
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNJB (Ycf48-like protein OS=Synechococcus sp. GN=CYB_2153 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 61/128 (47.66%), Postives = 83/128 (64.84%), Query Frame = 2 Query: 311 WERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 W++V +P +LLDIAF +HG+L+G + TLLE++DGG W R +P E E + SISF G EGW+ G+P ILLHT + G W I L++QLPG+ + I+A G +AEMVT+ GAIY T Sbjct: 34 WQQVEVPTQN--ILLDIAFTGTTPSHGWLVGDKATLLESRDGGLHWQVRELPGLEPEAY---LASISFAGAEGWVAGQPKILLHTLNEGSDWTSIRLNNQLPGEPLLIQALGPGAAEMVTNVGAIYRT 156
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNP6 (Ycf48-like protein OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc0372_d PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 305 SAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIY 688 S W+ + + + +LDIAF + HG+L+GT L ET DG ++W+ R++ + D YR NSISFKG EGW+VG+P+++LHT+D G++W RIPLS +LPG + + A G+ AEM TD AIY Sbjct: 40 SPWQVIDLGTEK--TILDIAFTSNK-QHGWLVGTDLALYETLDGEQSWSERAL----DLDETYRLNSISFKGDEGWVVGQPSLMLHTTDGGKNWLRIPLSEKLPGSPLLVTALGKGEAEMATDVAAIY 160
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNR3 (Ycf48-like protein OS=Synechococcus sp. (strain RCC307) GN=SynRCC307_0211 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26 Identity = 66/154 (42.86%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 233 LSLSISLAATTGLYEQPAKS--EEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIY 688 LSL + + T GL S A S W + ++ LD+AF + +HGFL+G+ + ++ET DGG+TW R I +E N+R SI F G EGWI G+P +LLH+ DAG+SW R+ L ++LPGD I A G K AE+ T+ GAIY Sbjct: 9 LSLLLCVGLTFGLGGCVTTSLPMAAASPWNSQKLGIESNP--LDVAFTNE--SHGFLVGSNRLVMETSDGGETWEEREIDLPADE--NFRLISIDFNGDEGWIAGQPGLLLHSDDAGQSWSRLLLDTKLPGDPYLITALGSKKAELATNVGAIY 156
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_PROMM (Ycf48-like protein OS=Prochlorococcus marinus (strain MIT 9313) GN=PMT_1895 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 2 Query: 353 LDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 LDI+F D NHGF++GT + ++E+ DGG +W RS+ EED N+R SI F G EGWI G+P +++H++DAG++W R+ L ++LPGD I G +AE+ T+ GAIY T Sbjct: 49 LDISF--SDANHGFVVGTNRLIMESNDGGVSWKKRSLDL--EEDENFRLISIDFNGNEGWIAGQPGLVMHSTDAGKNWSRLKLENKLPGDPYLITNLGPNNAELATNAGAIYRT 158
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNS9 (Ycf48-like protein OS=Synechococcus sp. (strain CC9902) GN=Syncc9902_0228 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24 Identity = 52/114 (45.61%), Postives = 79/114 (69.30%), Query Frame = 2 Query: 353 LDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 LD++F D +HGFL+G+ + + ET DGG W RS+ +EE N+R SI F+G+EGWI G+P +L+H++D G++W R+ L ++LPG+ I A G+ SAE+ T+ GA+Y T Sbjct: 49 LDVSFT--DPSHGFLVGSNRMIRETDDGGAHWNDRSLDLPDEE--NFRLISIDFEGQEGWIAGQPGLLMHSTDGGQNWTRLFLDTKLPGEPYLITALGKSSAELATNVGAVYKT 158
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_SYNSC (Ycf48-like protein OS=Synechococcus sp. (strain CC9605) GN=Syncc9605_0201 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23 Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 233 LSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 L L ISL+ + A + S W+ + +D LD+AF D +HG+L+G+ + + ET DGG W RS+ +EE N+R SI F G EGWI G+P +L+H+ D G++W R+ L ++LPG+ I A G SAE+ T+ GA+Y T Sbjct: 15 LVLGISLSGCVTTHVPTATT----SPWQAM--DLDTQANPLDVAFT--DSSHGYLVGSNRMIRETNDGGAHWNERSLDLPDEE--NFRLISIDFSGDEGWIAGQPGLLMHSDDGGQNWTRLFLDTKLPGEPYLITALGSHSAELATNVGAVYET 158
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_PROMT (Ycf48-like protein OS=Prochlorococcus marinus (strain NATL2A) GN=PMN2A_1662 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23 Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 353 LDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 LD+ FV D +GFL+GT + +LET DGG TW R++ E N+R S+ FKG+EGWI G+P ++LHT+D G++W R+ L ++LPGD I AE+ T GAIY T Sbjct: 49 LDVDFVDD--KNGFLVGTNRLILETNDGGITWKERNLDIPSEG--NFRLISVDFKGQEGWIAGQPGLILHTTDGGKNWTRLDLGNKLPGDPYLITTIDTDIAELATTAGAIYKT 158 The following BLAST results are available for this feature:
BLAST of FC868922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868922 ID=FC868922; Name=FC868922; organism=Citrus clementina; type=EST; length=694bpback to top |