FC868922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_PROMP (Ycf48-like protein OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=PMM0296 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 61/157 (38.85%), Postives = 90/157 (57.32%), Query Frame = 2 Query: 224 TATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 T TL +S ++TG+ K E+ S WE + LDI F+ D NHGFL+G+ + ++E+ DGGK+W RS+ A EE N+R I FKG EGW++G+P++++HT D G++W R+ L +LPG + AE+ T AIY T Sbjct: 14 TFTLCFVLSSCSSTGV-----KMSES-SPWETIQFEDQSNA--LDIDFI--DNNHGFLVGSNRLIMESNDGGKSWEKRSLDIAAEE--NFRLLDIDFKGSEGWLIGQPSLVMHTIDEGKNWTRLSL-GKLPGQPFLVSTVDDGVAELATTSAAIYTT 157
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_PROM9 (Ycf48-like protein OS=Prochlorococcus marinus (strain MIT 9312) GN=PMT9312_0298 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 206 RQFVSQTATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 ++ ++ L LSI L S W+ + LD+ F+ D N+GFL+G+ + ++E+ DGG+TW R++ EE N+R I FKG+EGW++G+P++++HT DAG++W R+ L ++LPG I AE+ T GAIY T Sbjct: 2 KKIITSFPNLLLSILLCFVLSSCSSTGVKMSDSSPWKTIQFQDQANA--LDVDFI--DNNNGFLVGSNRLIMESNDGGETWEKRNLDLPSEE--NFRLIDIDFKGQEGWLIGQPSLVMHTLDAGKNWTRLSLGNKLPGQPYLITTVDDGVAELATTAGAIYQT 158
BLAST of FC868922 vs. ExPASy Swiss-Prot
Match: YC48L_GLOVI (Ycf48-like protein OS=Gloeobacter violaceus GN=glr0855 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.345e-19 Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 233 LSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMVYIKATGRKSAEMVTDEGAIYIT 694 L L + L G P + +E W+ + + LLDIAFV D +G+ +G+R TLL T DGG++W ++P + D RF S+SF GK GWI G+P LL T + G SW I L +LPG + + A G +AE+V + G + T Sbjct: 7 LGLGLLLLVLAGCGAPPLERDE----WKVIPTGLSDKADLLDIAFVDD--KNGWAVGSRSTLLRTADGGESWT--AVPVKLDSDS--RFLSVSFDGKNGWIGGEPKRLLRTVNGGASWTSITLDQRLPGSPLKVYALGADTAEVVLNSGLVIKT 150 The following BLAST results are available for this feature:
BLAST of FC868922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868922 ID=FC868922; Name=FC868922; organism=Citrus clementina; type=EST; length=694bpback to top |