FC868923

Overview
NameFC868923
Unique NameFC868923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.034e-63
Identity = 112/165 (67.88%), Postives = 129/165 (78.18%), Query Frame = 3
Query:  165 QDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            Q  KDY +PPPAP F+ GEL  WSF+RA IAEF+AT LFLYITV TV+G  K    C++VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QC GAICG  +VK F K  Y   GGGAN ++ GY+KG   GAE++GTFVLVY
Sbjct:   14 QHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVY 178          

HSP 2 Score: 25.0238 bits (53), Expect = 1.034e-63
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +R+ARDSHVPIL
Sbjct:  187 KRSARDSHVPIL 198          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.348e-63
Identity = 118/179 (65.92%), Postives = 134/179 (74.86%), Query Frame = 3
Query:  147 GTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            G AA     KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VK FQ + +   GGGAN L+ GYSKG GL AEI+GTFVLVY
Sbjct:   10 GGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVY 188          

HSP 2 Score: 26.5646 bits (57), Expect = 1.348e-63
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +RNARDSHVP+L
Sbjct:  197 KRNARDSHVPVL 208          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.759e-63
Identity = 122/198 (61.62%), Postives = 138/198 (69.70%), Query Frame = 3
Query:   90 GKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            GKE DV  G                  V+DY +PPPAPL +  EL  WS YRA IAEFVAT LFLY+TV TV+G         S   + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+CG A+VKGFQ S Y+  GGGAN L+ GYSKG GL AEI+GTFVLVY
Sbjct:    2 GKEADVEAGG-----------------VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVY 182          

HSP 2 Score: 26.5646 bits (57), Expect = 1.759e-63
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +RNARDSHVP+L
Sbjct:  191 KRNARDSHVPVL 202          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.989e-63
Identity = 121/185 (65.41%), Postives = 136/185 (73.51%), Query Frame = 3
Query:  129 RESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            ++ +  G  A     KDYT+PPPAPL +  EL+ WS YRA IAEF+AT LFLYITV TV+G         S   + C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCLGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVY
Sbjct:    3 KDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVY 187          

HSP 2 Score: 24.6386 bits (52), Expect = 2.989e-63
Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +R+ARDSHVP+L
Sbjct:  196 KRSARDSHVPVL 207          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.989e-63
Identity = 121/179 (67.60%), Postives = 133/179 (74.30%), Query Frame = 3
Query:  147 GTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            G  A     KDYT+PPPAPL +  EL+ WS YRA IAEF+AT LFLYITV TV+G         S   + C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCLGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVY
Sbjct:   10 GPEAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVY 188          

HSP 2 Score: 24.6386 bits (52), Expect = 2.989e-63
Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +R+ARDSHVP+L
Sbjct:  197 KRSARDSHVPVL 208          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 3.898e-63
Identity = 114/172 (66.28%), Postives = 132/172 (76.74%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK----------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLY+TV TV+G             + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YM+ QCLGA+CG  +VK FQ + ++  GGGAN L+ GYS+G GLGAEIVGTFVLVY
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVY 190          

HSP 2 Score: 26.5646 bits (57), Expect = 3.898e-63
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +RNARDSHVP+L
Sbjct:  199 KRNARDSHVPVL 210          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 3.898e-63
Identity = 118/177 (66.67%), Postives = 134/177 (75.71%), Query Frame = 3
Query:  153 AAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            AA   + KDY++PPPAPL +  EL+ WS YRA IAEFVAT LFLYITV TV+G         S   + C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVY
Sbjct:    7 AAAAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVY 183          

HSP 2 Score: 26.5646 bits (57), Expect = 3.898e-63
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +RNARDSHVP+L
Sbjct:  192 KRNARDSHVPVL 203          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 3.899e-63
Identity = 116/164 (70.73%), Postives = 129/164 (78.66%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            KDYT+PPPAPLF+ GEL  WSFYRA IAEF+AT LFLYITV TV+G  V  S  +C  VG  GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+S+ RAV Y++ QCLG I G  +VKG  K QY   GGGANM++ GYS G  LGAEI+GTFVLVY
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVY 178          

HSP 2 Score: 26.5646 bits (57), Expect = 3.899e-63
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +RNARDSHVP+L
Sbjct:  187 KRNARDSHVPVL 198          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.127e-62
Identity = 113/162 (69.75%), Postives = 127/162 (78.40%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLY+TV TV+G       C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG  +VK F  + Y+ LGGGAN ++ GYS G  LGAEI+GTFVLVY
Sbjct:   13 KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVY 174          

HSP 2 Score: 24.6386 bits (52), Expect = 1.127e-62
Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +R+ARDSHVP+L
Sbjct:  183 KRSARDSHVPVL 194          
BLAST of FC868923 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.498e-62
Identity = 117/170 (68.82%), Postives = 132/170 (77.65%), Query Frame = 3
Query:  174 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVY 659
            KDY++PPPAPL +  EL+ WS YRA IAEFVAT LFLYITV TV+G         + + + CS VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGLFLARK+SL RAV Y++ Q LGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVY
Sbjct:   19 KDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVY 188          

HSP 2 Score: 26.5646 bits (57), Expect = 2.498e-62
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  682 QRNARDSHVPIL 717
            +RNARDSHVP+L
Sbjct:  197 KRNARDSHVPVL 208          
The following BLAST results are available for this feature:
BLAST of FC868923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PIP1_ATRCA1.034e-6367.88Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP21_ORYSJ1.348e-6365.92Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP25_ORYSJ1.759e-6361.62Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP24_MAIZE2.989e-6365.41Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE2.989e-6367.60Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_MAIZE3.898e-6366.28Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP25_MAIZE3.898e-6366.67Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP26_ORYSJ3.899e-6370.73Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP28_ARATH1.127e-6269.75Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP23_ORYSJ2.498e-6268.82Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC31006E10EF AbioticL1 Citrus clementina cDNA clone C31006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868923 ID=FC868923; Name=FC868923; organism=Citrus clementina; type=EST; length=717bp
GGAGCCCGTTGTGCCATTTATTTCTTCAATTCACTCCCAAGAAACTTGAA
CCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGA
GGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAA
CCGCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCG
CCGCTCTTCGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGG
CATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAA
CAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATC
CAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTG
CACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGC
TGTTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATA
ATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCA
GAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAG
GCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTT
CTTGTTTACCTGTCTTCTCGGCCACTGATGCCAGCGCAATGCCCGCGATT
CTCATGTTCCTATATTG
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