FC868952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.506e-25 Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V VGDGA GKT +L +T FPT+YVPTVF+N+ ++ VDG +V L LWDTAGQE+Y RLRP+SY A + ++ F++ S S ENV+ KWI E Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEE 105
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO4_SCHPO (GTP-binding protein rho4 OS=Schizosaccharomyces pombe GN=rho4 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24 Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V VGDG GKTC+LI ++S TFP YVPTVF+N+ ++ + + L LWDTAGQE+Y+RLRPLSY ++V +L FS+ AS NV +KW PE Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPE 113
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOC_EMENI (GTP-binding protein rhoC OS=Emericella nidulans GN=rhoC PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24 Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V VGDG GKTC+LISY+ FP YVPTVF+N+ + G TV L LWDTAGQE+Y+RLRPLSY D+ + F++ AS ENV KW PE Sbjct: 71 KFVVVGDGGCGKTCLLISYSQGYFPEKYVPTVFENYITQTLHRRSGKTVELALWDTAGQEEYDRLRPLSYPETDLLFVCFAIDCPASLENVMDKWYPE 168
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24 Identity = 49/97 (50.52%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IKCV VGD AVGKT +L+ +TS TFP Y PTV++N +V++DG ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGE 101
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24 Identity = 50/97 (51.55%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IK VG+G +GKT ML+SYTSN+ +Y PTVFDN+S ++ + NL LWDTAGQE++++LR LSY DVF+L FSLI+ +S+ N+ W+ E Sbjct: 4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQE 100
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24 Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IKCV VGD AVGKT +L+ +TS TFP Y PTV++N +V +DG ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISE 101
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23 Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IKCV VGD AVGKT +L+ +TS TFP Y PTV++N +V +DG ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGE 101
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.994e-23 Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 360 AQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 A SA + +K V VGDG GKT +L+ Y +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE Sbjct: 12 APSSARKELKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPE 116
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.994e-23 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IK V VGDGA GKT +L+SYT FP DYVPT+F+N+ N+ G + L LWDTAGQE+Y+RLRPLSY D+ ++ ++ ++ S N + W PE Sbjct: 53 IKIVVVGDGATGKTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPE 150
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.162e-22 Identity = 47/102 (46.08%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 369 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 S + +K V VGDG GKT +L+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE Sbjct: 19 SGRKELKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPE 120 The following BLAST results are available for this feature:
BLAST of FC868952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 365
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868952 ID=FC868952; Name=FC868952; organism=Citrus clementina; type=EST; length=674bpback to top |