FC868952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.162e-22 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 378 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ+DY+RLRPL Y A V +L F + S S++N+ +W PE Sbjct: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPE 114
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.982e-22 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +K V VGDG GKT +L+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE Sbjct: 20 LKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPE 116
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.381e-22 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V +GDGA GKT +L +T FP Y PT+F+N+ ++ VDG+++ L LWDTAGQE+Y++LR LSY V ++ F++ S+ S ENV KW+PE Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPE 110
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.838e-22 Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +K V VGDG GKT +++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V +L F + + S++NV+ +W PE Sbjct: 18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPE 114
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO3_YEAST (GTP-binding protein RHO3 OS=Saccharomyces cerevisiae GN=RHO3 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.423e-20 Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V +GDGA GKT +L +T FP Y PTVF+N+ ++ VD + L LWDTAGQE+++RLR LSY +L FS+ S+ S ENV KW+ E Sbjct: 18 KIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGE 113
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.423e-20 Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V +GDGA GKT +L +T FP Y PTVF+N+ ++ VD + L LWDTAGQE+++RLR LSY +L FS+ S+ S ENV KW+ E Sbjct: 17 KIVILGDGACGKTSLLNVFTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSE 112
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.165e-20 Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V +GDGA GKT +L +T FP Y PTVF+N+ + VDG V+L LWDTAGQE+Y RLRP SY AD+ ++ F++ + S N KW E Sbjct: 9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADE 104
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.679e-19 Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYT-SNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IK VT+GD VGKT +L++YT S +FP +YVPT DNF ++G +L +WDTAG E Y+ LRPL Y D+ +L F++ ++ S+ ++ WI E Sbjct: 6 IKIVTIGDYGVGKTTLLMTYTASGSFPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITE 103
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 387 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 K V GDGA GKT +L +T F Y PTVF+N+ ++ +D V L LWDTAGQE+++RLR LSY V ++ FS+ + S ENV KW+ E Sbjct: 19 KVVVCGDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDE 114
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.599e-18 Identity = 39/98 (39.80%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 381 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +IK + +GD GKT M+++Y++ +FPT YVP+ D S ++ + ++G WD++ +++ RP +Y +V IL FS+ S S+ENV+KKWIPE Sbjct: 5 YIKLLVLGDSKTGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPE 102 The following BLAST results are available for this feature:
BLAST of FC868952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 365
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868952 ID=FC868952; Name=FC868952; organism=Citrus clementina; type=EST; length=674bpback to top |