FC868952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.618e-32 Identity = 61/103 (59.22%), Postives = 78/103 (75.73%), Query Frame = 3 Query: 366 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 MSA+ IK V +GDGAVGKTC+LISY +N FP DY+PTVFDN+ N+ + LGLWDTAGQE+Y++LRPLSY A+VF++ FS+ + S+ENV KW PE Sbjct: 1 MSAAEVIKLVVIGDGAVGKTCLLISYANNRFPEDYIPTVFDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPE 103
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.604e-32 Identity = 60/100 (60.00%), Postives = 80/100 (80.00%), Query Frame = 3 Query: 375 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +R +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVF++ FS+++ ASY NV ++W+PE Sbjct: 19 NRILKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPE 118
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOJ_HUMAN (Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.049e-31 Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 378 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 + +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVF++ FS+++ ASY NV ++W+PE Sbjct: 20 KMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPE 118
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RAC2_CAEEL (Ras-related protein rac-2 OS=Caenorhabditis elegans GN=rac-2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.336e-31 Identity = 60/97 (61.86%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 IKCV VGDGAVGKTC+L+SYT+N FP +Y+ TVFD +S NV+VDG +NL LWDTAGQ+DY++ R LS+ DVF++ F+L + AS+ENV KW PE Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPE 100
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOU_HUMAN (Rho-related GTP-binding protein RhoU OS=Homo sapiens GN=RHOU PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31 Identity = 58/99 (58.59%), Postives = 81/99 (81.82%), Query Frame = 3 Query: 378 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 R +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y D+F+L FS++S +S++NV++KW+PE Sbjct: 48 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPE 146
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOQ_RAT (Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31 Identity = 58/97 (59.79%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PE Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE 106
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOQ_MOUSE (Rho-related GTP-binding protein RhoQ OS=Mus musculus GN=Rhoq PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31 Identity = 58/97 (59.79%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PE Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE 106
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOQ_HUMAN (Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31 Identity = 58/97 (59.79%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PE Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE 106
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOU_MOUSE (Rho-related GTP-binding protein RhoU OS=Mus musculus GN=Rhou PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.797e-31 Identity = 58/99 (58.59%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 378 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 R +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y D+F+L FS++S S++NV +KW+PE Sbjct: 51 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPE 149
BLAST of FC868952 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.797e-31 Identity = 57/97 (58.76%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 384 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE 674 +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y AD+F+L FS++ +S++NV++KW+PE Sbjct: 47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPE 143 The following BLAST results are available for this feature:
BLAST of FC868952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 365
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868952 ID=FC868952; Name=FC868952; organism=Citrus clementina; type=EST; length=674bpback to top |