FC868956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.503e-33 Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL-RHLRAVSTEDATAFAE 651 DYD L K++L+GDSGVGKS LL RFT + F+ +T G++F + + D K+VK QIWDTAGQER+R ITSAYYRGA G +LVYD+T +F NV W++ + H N+ +LVGNK DL R VS A A+ Sbjct: 9 DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALAD 147
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.503e-33 Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 1 Query: 235 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 ++YDYLFK++LIGDS VGKS LL RF + + ST GV+F R+I D K +K QIWDTAGQER+R ITS+YYRGA G ++VYD T +F NV++WL E+ + + ++ +L+GNK D+ + VSTE A A+ Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALAD 141
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.503e-33 Identity = 63/141 (44.68%), Postives = 97/141 (68.79%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 YD+LFK++LIGDSGVGK+ L+ RF + F+ ST G++F R++ + K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W+K ++++ + + +L+GNK D+ R V E A A + Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRI 145
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.963e-33 Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 1 Query: 235 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 +++DYLFK++LIGDS VGKS L RF + + ST GV+F R++ + K VK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ + + ++ +LVGNK DL RAV T A A+A+ Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQ 141
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.963e-33 Identity = 66/137 (48.18%), Postives = 93/137 (67.88%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 YDYL K++LIGDSGVGKS LL RF+ + F+ +T G++F R+I + K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H ++ ML+GNK D+ + V + + A+ Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLAD 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33 Identity = 63/136 (46.32%), Postives = 96/136 (70.59%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFA 648 YD+LFK++LIGDSGVGK+ L+ RF + F+ ST G++F R++ + K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W+K ++++ + + +L+GNK D+ R V E A A Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLA 140
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33 Identity = 63/136 (46.32%), Postives = 96/136 (70.59%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFA 648 YD+LFK++LIGDSGVGK+ L+ RF + F+ ST G++F R++ + K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W+K ++++ + + +L+GNK D+ R V E A A Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLA 140
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33 Identity = 63/136 (46.32%), Postives = 96/136 (70.59%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFA 648 YD+LFK++LIGDSGVGK+ L+ RF + F+ ST G++F R++ + K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W+K ++++ + + +L+GNK D+ R V E A A Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLA 140
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.348e-33 Identity = 72/138 (52.17%), Postives = 95/138 (68.84%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 +YDYLFK++LIGDSGVGKS LL RF + ++ ST GV+F R+I D K VK QIWDTAGQER+R ITS+YYRGA G +VYDVT +F NV++WL+E+ + + +LVGNK+D+ + V A FA+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFAD 141
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33 Identity = 73/146 (50.00%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 235 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFA-ERETLFL 669 + YD+LFK ++IG++G GKS LL +F +F +S T GVEF ++ I K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIVI+L GNK DL R V+ +A+ FA E E +FL Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFL 148 The following BLAST results are available for this feature:
BLAST of FC868956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868956 ID=FC868956; Name=FC868956; organism=Citrus clementina; type=EST; length=682bpback to top |