FC868956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 250.366 bits (638), Expect = 6.683e-66 Identity = 122/144 (84.72%), Postives = 134/144 (93.06%), Query Frame = 1 Query: 232 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKST GVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A AFAE+ L Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.729e-66 Identity = 121/144 (84.03%), Postives = 134/144 (93.06%), Query Frame = 1 Query: 232 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKST GVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGNK+DLRHLRAV T++A AFAE+ L Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.729e-66 Identity = 119/151 (78.81%), Postives = 136/151 (90.07%), Query Frame = 1 Query: 214 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETLF 666 M YRAD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKST GVEFAT++ + + K+VKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH TFEN RWL+ELR HTD NIV+ML+GNK DLRHL AV TE+A AFAERE+L+ Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLY 151
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.170e-64 Identity = 119/148 (80.41%), Postives = 134/148 (90.54%), Query Frame = 1 Query: 220 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKST GVEFATR+++ + + VKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIML+GNK DL+HLRAV+TEDA ++AE+E L Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGL 149
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.483e-62 Identity = 115/148 (77.70%), Postives = 131/148 (88.51%), Query Frame = 1 Query: 220 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKST GVEFATR+++ + K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+ GNK+DL+HLRAVS ED A AE+E L Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGL 149
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.704e-61 Identity = 113/148 (76.35%), Postives = 131/148 (88.51%), Query Frame = 1 Query: 220 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKST GVEFATR+++ + K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+ GNK+DL HLRAVS +D A +E+E L Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGL 149
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.480e-60 Identity = 113/144 (78.47%), Postives = 127/144 (88.19%), Query Frame = 1 Query: 232 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +D+YDYLFK VLIGDSGVGKSNLL RFTRNEF++ESKST GVEFATR+I D+K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR+H DSNIVIMLVGNK DL HLRAVSTE+A AFA L Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNL 147
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 230.335 bits (586), Expect = 7.157e-60 Identity = 110/147 (74.83%), Postives = 128/147 (87.07%), Query Frame = 1 Query: 223 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKST GVEFATR+ + + K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM+ GNK+DL HLR+V+ ED + AE+E L Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGL 149
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.082e-59 Identity = 111/148 (75.00%), Postives = 129/148 (87.16%), Query Frame = 1 Query: 220 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKST GVEFATR+++ + K VKAQIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV+RWL+ELRDH DSNIVI+L GNK+DL+HLRAVS +D A ++E L Sbjct: 2 ANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGL 149
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 6.059e-59 Identity = 109/147 (74.15%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 226 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETLF 666 R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKST GVEFAT+S++ + K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELRDH DS+IVIM+VGNK+DL HLRAVS ++ A AE+E LF Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLF 150 The following BLAST results are available for this feature:
BLAST of FC868956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868956 ID=FC868956; Name=FC868956; organism=Citrus clementina; type=EST; length=682bpback to top |