FC868956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.767e-50 Identity = 97/144 (67.36%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 232 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 ++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++T GVEF+TR++ VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A FAE L Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGL 149
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.145e-49 Identity = 95/141 (67.38%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 244 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETLF 666 +YLFK+V+IGDS VGKSNLLSR+ RNEFS SK+T GVEF T+S+ + K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL ++RAVS E+ A AE E LF Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLF 150
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.424e-49 Identity = 96/149 (64.43%), Postives = 117/149 (78.52%), Query Frame = 1 Query: 229 ADDDY---DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETLF 666 +DDD +YLFK+V+IGDS VGKSNLL+R+ RNEF+ SK+T GVEF T+S+ D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + ML+GNK DL +RAVS E+ + AE E LF Sbjct: 2 SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLF 150
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.548e-46 Identity = 85/140 (60.71%), Postives = 116/140 (82.86%), Query Frame = 1 Query: 232 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 +++ +YLFK+V+IGDS VGKSNLL+RFTRNEF+ ++K+T GV+F T+SI D+K + AQ WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR+ + +I+IM+VGNK+DL R V T++A AFAE Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAE 143
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.356e-42 Identity = 77/139 (55.40%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAER 654 +YDYL K+V+IGDSGVGKSNLLSR+ +NEFS+ ST GVEF+T++++ D+K++K Q+WDTAGQE+Y +IT +YY+GA+GAL+VY++ +F N+E+WLK+ R++ + IMLVGNK+DL+ R VST + FAE+ Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEK 145
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 4.823e-40 Identity = 78/141 (55.32%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y+Y+FK ++IGD GVGKS LL +FT N+F +S T GVEF TR + ++K +K QIWDTAGQER+RA+T +YYRGA GALLVYD+TR +T+ ++ WL + R+ T+ N VIML+GNK DL R V+ E+A+AFA++ L Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGL 145
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39 Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y YLFK ++IGD+GVGKS LL +FT F T GVEF R I D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IMLVGNK DL H RAVS E+ FA+ L Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGL 143
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y YLFK ++IGD+GVGKS LL +FT F T GVEF R I D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK DL H RAV+TE+ FA+ L Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGL 143
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y YLFK ++IGD+GVGKS LL +FT F T GVEF R I D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK DL H RAV+TE+ FA+ L Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGL 143
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y YLFK ++IGD+GVGKS LL +FT F T GVEF R I D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IMLVGNK DL H RAVS E+ FA+ L Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGL 143 The following BLAST results are available for this feature:
BLAST of FC868956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868956 ID=FC868956; Name=FC868956; organism=Citrus clementina; type=EST; length=682bpback to top |