FC868956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.896e-38 Identity = 77/141 (54.61%), Postives = 96/141 (68.09%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y YLFK ++IGD+GVGKS LL +FT F T GVEF R + D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H+ SN+VIML+GNK+DL R V E+ AFA L Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGL 143
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 226 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETLFLWK 675 R Y++LFK +++GDS VGKSNLL +F F+ S T GVEF +RSI +DK +K QIWDTAGQE++R+IT AYYRGAV A++VYD+TR +FE++ WL + R + ++ +L+GNKADL R VST +A FAE+ L ++ Sbjct: 16 RKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFE 165
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +Y Y+FK ++IGD GVGKS LL +FT +F + T GVEF TR I + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A FAE L Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +Y Y+FK ++IGD GVGKS LL +FT +F + T GVEF TR I + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A FAE L Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +Y Y+FK ++IGD GVGKS LL +FT +F + T GVEF TR I + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A FAE L Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +Y Y+FK ++IGD GVGKS LL +FT +F + T GVEF TR I + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A FAE L Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +Y Y+FK ++IGD GVGKS LL +FT +F + T GVEF TR I + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A FAE L Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 +Y Y+FK ++IGD GVGKS LL +FT +F + T GVEF TR I + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A FAE L Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGL 148
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37 Identity = 74/138 (53.62%), Postives = 101/138 (73.19%), Query Frame = 1 Query: 238 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 +YDYLFK++LIGDSGVGKS LL RF + ++ ST GV+F R+I D KI+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT HV+F NV++W++E++ + ++ +LVGNK DL + V T A +A+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYAD 141
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 8.514e-37 Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERETL 663 Y +LFK ++IGD+GVGKS LL +FT F T GVEF R I D+K +K QIWDTAGQE +R+IT +YYRG+ GALLVYD+TR TF ++ WLK+ R + +SN+ I+L+GNK+D+ RAVS E+ FA+ L Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGL 142 The following BLAST results are available for this feature:
BLAST of FC868956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868956 ID=FC868956; Name=FC868956; organism=Citrus clementina; type=EST; length=682bpback to top |