FC868956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 YDYL K++LIGDSGVGKS LL RF+ + F+ +T G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G LL+YDVT +F+NV W + H N+ +L+GNK D R VS E A A+ Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALAD 142
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 66/130 (50.77%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTE 630 YDYLFK++LIGDSGVGK+ +L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKE 134
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 241 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFA 648 YDYLFK++LIGDSGVGK+ L RF+ + F+ ST G++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +FEN+ W++ + +H ++ M++GNK D R VS E A Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLA 140
BLAST of FC868956 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 69/140 (49.29%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 232 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTTGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 651 D+ YD+LFK+VL+GD+ VGK+ ++ RF FS ST GV+F +++ K VK QIWDTAGQER+R IT +YYR A GA+L YD+T+ +F +V W++++R + SNIV +L+GNK+DL LR VS +A + AE Sbjct: 12 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAE 151 The following BLAST results are available for this feature:
BLAST of FC868956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868956 ID=FC868956; Name=FC868956; organism=Citrus clementina; type=EST; length=682bpback to top |