FC868960

Overview
NameFC868960
Unique NameFC868960
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRK--------------YKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV-----ENSPDF----EKDFVVCRLERKRE 568
            GFRF+PTD ++IL   +++     F+   I E+DL   EPW+LP  S+ +  E+ WYFF     K     R  R TKEGYWK TG+   I R+               K +++G KK L F     A +  KT WV+HE  +      + P+     + ++VVC++  K++
Sbjct:   22 GFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLP--SKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYM-GRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQ 189          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV-----ENSPDFEKDFVVCRLERKR 565
            GFRFYPTDE++++    ++     FS++ I EIDLY F+PW LP  S+    E+ WYFF     K     R  R    GYWK TG    I  + +   +G KK L F     A +  KT W++HE  +      N      D+V+CR+ +K+
Sbjct:   17 GFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLP--SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRR--VGIKKALVF-YIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 163          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  119 LVGFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPD 523
            L GFRF+PTDE+++     ++          IK++D+Y ++PW+LP  + +  +E  WYF+C    K   S R  R T  G+WK TG    I     T  IG KK L F R   AA+  KT+W++HE  + +  D
Sbjct:   21 LPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKE--WYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYR-GRAAKGVKTDWMMHEFRLPSLSD 152          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 55/151 (36.42%), Postives = 79/151 (52.32%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEI-AVENSPDFEK----DFVVCRLERK 562
            GFRFYPTDE++++    ++     FS++ I +IDLY F+PW+LP  S+    E+ WYFF     K     R  R    GYWK TG    I    +   +G KK L F     A +  KT W++HE   +E+S         D+V+CR+ +K
Sbjct:   17 GFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLP--SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRR--VGIKKALVFYA-GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKK 162          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV-----ENSPDFEKDFVVCRLERKR 565
            GFRFYPTDE++++    ++     FS++ I EIDLY F+PW LP  ++    E+ WYFF     K     R  R    GYWK TG    I    + + +G KK L F     A +  KT W++HE  +      N      D+V+CR+ +K+
Sbjct:   17 GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP--NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVF-YIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 163          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 58/157 (36.94%), Postives = 76/157 (48.41%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIA---VENSPDFEK-------DFVVCRLERKR 565
            GFRF+PTDE+++     +R      +V  I EIDLY F PWELP    +  E+E WYFF     K     R  R    GYWK TG    I    K + +G KK L F     A +  KT W++HE     V+ S    K       D+V+CR+  K+
Sbjct:   53 GFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELP-EMALYGEKE-WYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIG---KPKTLGIKKALVFYA-GKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKK 203          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16
Identity = 53/150 (35.33%), Postives = 78/150 (52.00%), Query Frame = 2
Query:  110 MDSLVGFRFYPTDEQIIL-LLTMKRRDPAGFSV-RTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEKDFVVCRL 553
            M++ VG RF PTDE+I++  L  K  D     V R I  + +   +PWELPC S I+ ++  W FF     K     +  R+TK G+WK TGR   I R    + IG KKIL F      +++ K++WVIHE    +       + +C++
Sbjct:    1 METPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMR--NRQQIGEKKILMF----YTSKESKSDWVIHEYHGFSHNQMMMTYTLCKV 144          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16
Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 2
Query:  110 MDSLVGFRFYPTDEQII-LLLTMKRRDPAGFSVRT-IKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYK------TEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEKDFVVCRLERK 562
            M+  VGF F P DE+++   L  K        V   I E+++ S++PW L   S+ +S + +WYFF     +N +  R  R T  G WK TG    +K ++          IG K++L F  D    +K K++WVIHE   +  P+ ++ +V+CRLE K
Sbjct:    1 MEDQVGFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSRR--ENNKGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFL-DGRYPDKTKSDWVIHEFHYDLLPEHQRTYVICRLEYK 156          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 51/156 (32.69%), Postives = 76/156 (48.72%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV---ENSPDFEK------DFVVCRLERKR 565
            GFRF+PTDE++++    ++       V  I E+DLY  +PW+LP  +    +E  WYFF     K     R  R    GYWK TG    +  K     +G KK L F     A    KT+W++HE  +   + +P  +K      ++V+CRL  K+
Sbjct:   24 GFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKE--WYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVF-YSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKK 176          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 52/161 (32.30%), Postives = 79/161 (49.07%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNI--KRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV-ENSP----DFEK--------DFVVCRLERK 562
            GFRF+PTDE++++    ++ D     V  I ++DLY F+PWELP  +    +E  WYFF     K     R  R    GYWK TG    +       ++ +G KK L F       +  K++W++HE  + +N P    DF          D+V+CR+ +K
Sbjct:   20 GFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVF-YSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKK 177          
The following BLAST results are available for this feature:
BLAST of FC868960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC77_ORYSJ1.227e-1733.33NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC55_ARATH1.602e-1736.18NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC94_ARATH2.733e-1736.30Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC72_ARATH3.570e-1736.42NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH3.570e-1735.53NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NA102_ARATH4.662e-1736.94NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC3_ARATH1.357e-1635.33NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NAC1_ARATH1.357e-1633.33NAC domain-containing protein 1 OS=Arabidopsis tha... [more]
NAC68_ORYSJ2.314e-1632.69NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC18_ARATH2.314e-1632.30NAC domain-containing protein 18 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC31007A07EF AbioticL1 Citrus clementina cDNA clone C31007A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868960 ID=FC868960; Name=FC868960; organism=Citrus clementina; type=EST; length=703bp
ATAGCCCACTGGCTCTTTTAATCTTTTGCTGACCAAATTGGAAAGAAGAA
GCTCTTACTCTCTCATTCTTGTTCTACGTTTCTCCTGCTGGGTGTTGAAT
CAGAAACCAATGGACAGTCTCGTGGGGTTCAGATTCTATCCAACTGATGA
ACAAATTATTCTTCTACTGACGATGAAGAGACGTGACCCTGCAGGTTTCT
CCGTCCGTACGATCAAGGAAATCGATCTCTACAGCTTTGAGCCCTGGGAG
CTACCCTGCCATTCTGAGATTCAGTCTGAGGAAGAAGTGTGGTACTTTTT
CTGTGAACCTTGTTACAAAAATGCCGAGAGTAAACGGGTACGTAGAAGAA
CAAAGGAAGGCTATTGGAAAAAGACTGGCAGAGGTTCTAACATCAAGCGC
AAATACAAAACTGAGGTGATTGGTACGAAGAAGATTTTGTCTTTTTCCCG
CGATGATGCTGCTGCCGAGAAAGATAAGACTGAGTGGGTTATACACGAGA
TAGCTGTTGAAAATAGCCCTGACTTTGAGAAGGATTTTGTTGTGTGTCGC
CTTGAAAGAAAACGGGAGAAGAAGACGCTTGGTGTTGTTTCCACTAAGAG
AAAACGGGAGAAGAAGACGCTTGGTGTTGTTTCCACTAAGAGAAAGCGGG
AGAAGAAGCTTGGTGTTTCACCAGCGATGGTGATCATCTTTGTCAATTTA
CTT
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