FC868960

Overview
NameFC868960
Unique NameFC868960
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 2
Query:  119 LVGFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENS 517
            L GFRF+PTDE+++     ++ +     +  IK+ID+Y ++PW+LP  S +  +E  WYFFC    K   S R  R T  G+WK TG    +      + +G KK L +    +A +  KT+W++HE  + ++
Sbjct:   19 LPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKE--WYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYS--NLDCVGLKKSLVYYL-GSAGKGTKTDWMMHEFRLPST 146          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 55/156 (35.26%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIA---VENSPDFEK------DFVVCRLERKR 565
            GFRF+PTDE++++    ++      +V  I EIDLY ++PWELP    +  E+E WYFF     K     R  R    GYWK TG    I      + +G KK L F     A + +KT W++HE     V+ S   +K      D+V+CR+  K+
Sbjct:   10 GFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELP-GLALYGEKE-WYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIG---LPKPVGIKKALVFYA-GKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKK 159          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 57/199 (28.64%), Postives = 92/199 (46.23%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFE---------KDFVVCRLERKREKKTL-----GVVSTKRKREKKTLGVVSTKRKREKKLGVSPAM 679
            GFRF+PTDE++I+     +       V  I E+D+Y F+PW+LP  +E    E  WYFF     K     R  R    GYWK TG    I     +  +G KK L F +     +  KT+W++HE  + +S              ++V+CR+ +KR    L     G +      ++  + V   +R+ E+++ +  +M
Sbjct:   12 GFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENE--WYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHS--GSSNVGVKKALVFYK-GRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEGFMDEVLMEDETKVVVNEAERRTEEEIMMMTSM 205          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 53/156 (33.97%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV---------ENSPDFEKDFVVCRLERKR 565
            GFRF+PTDE++++    +R      +V  I EIDLY F+PW+LP    +  E+E WYFF     K     R  R    GYWK TG    +      + +  KK L F     A + +KT W++HE  +         +NS   + D+V+CR+  K+
Sbjct:   12 GFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLP-RMALYGEKE-WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVG---SPKPVAIKKALVFYA-GKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLD-DWVLCRIYNKK 160          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEI-QSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV-ENSPDFEKD-FVVCRLERKR 565
            GFRF+PTDE+++     K+       +  I+EIDL   EPW+L     I    +  WYFF     K     R  R T  G+WK TGR   I        IG +K L F    A   K KT+W++HE  + +++ D ++D +VVCR+  K+
Sbjct:   13 GFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACR-IGMRKTLVFYVGRAPHGK-KTDWIMHEYRLDQDNVDVQEDGWVVCRVFMKK 160          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  110 MDSLVGFRFYPTDEQIIL-LLTMKRRDPAGFSVRTIKEIDLYSFEPW-ELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIK-RKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEKDFVVCRLERKRE 568
            M  L+G+RF PT E++I   L  K           I EI++ S +P  +LP  + IQSE+  WYFF    Y N    +++R T  G+WK TG    I+ ++    VIG KK L +  +  +    +T WV+HE  +   P  ++ +VVC+++ K E
Sbjct:    2 MKGLIGYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVY-HEGKSPHGVRTPWVMHEYHITCLPHHKRKYVVCQVKYKGE 156          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 55/169 (32.54%), Postives = 89/169 (52.66%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKR------RDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENS---PDF-----EKDFVVCRLERKREKKTLGVV 589
            GFRF+P D++++    M+R      R P       + ++DL   EPW++P  + +  ++  WYF+ +   K A   R  R T  GYWK TG+   I RK K  ++G +K L F +  A   + KT+WV+HE  ++ S   P+      ++D+V+CR+     K T GV+
Sbjct:   22 GFRFHPKDDELVCDYLMRRSLHNNHRPPL-----VLIQVDLNKCEPWDIPKMACVGGKD--WYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGK--LVGMRKTLVFYQGRAPRGR-KTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRV---FHKNTEGVI 177          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQS-EEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDF---------------EKDFVVCRLERKR 565
            GFRF+PT+E+++     K+ +     +  I+E+DL   EPW++     I S  +  WYFF     K     R  R T  G+WK TGR   I    +   IG +K L F +   A    K++W++HE  ++++P                 E+ +VVCR+ RK+
Sbjct:   19 GFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRR--IGLRKTLVFYK-GRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKK 178          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 52/159 (32.70%), Postives = 69/159 (43.40%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFE----------KDFVVCRLERKREK 571
            GFRF+PTDE+++      R       V  I E+DLY  +PW+LP H  +    E WYFF     K     R  R    GYWK TG    +    +T   G KK L F          KTEW++HE  +                  D+V+CRL  K+ +
Sbjct:   20 GFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLP-HRALFGRRE-WYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRT--AGIKKALVFYH-GKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNE 173          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13
Identity = 48/162 (29.63%), Postives = 71/162 (43.83%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIA---VENSPDFEK------------DFVVCRLERKR 565
            GFRF+PTD+++++    ++      +   I E+DLY F PW+LP        E+ WYFF     K    +R  R    GYWK TG    +        +  KK L F       +  KT W++HE     V+ S    K            D+V+CR+  K+
Sbjct:   12 GFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLP--ERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVG---SPRAVAIKKALVFYA-GKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKK 167          
The following BLAST results are available for this feature:
BLAST of FC868960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC42_ARATH5.155e-1633.83NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC2_ARATH6.733e-1635.26NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC29_ARATH8.793e-1628.64NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC48_ORYSJ1.500e-1533.97NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC76_ORYSJ2.558e-1535.33NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC68_ARATH2.558e-1533.97NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC22_ARATH9.722e-1532.54NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC12_ARATH1.658e-1430.67NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC67_ORYSJ4.825e-1432.70NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC71_ORYSJ3.127e-1329.63NAC domain-containing protein 71 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC31007A07EF AbioticL1 Citrus clementina cDNA clone C31007A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868960 ID=FC868960; Name=FC868960; organism=Citrus clementina; type=EST; length=703bp
ATAGCCCACTGGCTCTTTTAATCTTTTGCTGACCAAATTGGAAAGAAGAA
GCTCTTACTCTCTCATTCTTGTTCTACGTTTCTCCTGCTGGGTGTTGAAT
CAGAAACCAATGGACAGTCTCGTGGGGTTCAGATTCTATCCAACTGATGA
ACAAATTATTCTTCTACTGACGATGAAGAGACGTGACCCTGCAGGTTTCT
CCGTCCGTACGATCAAGGAAATCGATCTCTACAGCTTTGAGCCCTGGGAG
CTACCCTGCCATTCTGAGATTCAGTCTGAGGAAGAAGTGTGGTACTTTTT
CTGTGAACCTTGTTACAAAAATGCCGAGAGTAAACGGGTACGTAGAAGAA
CAAAGGAAGGCTATTGGAAAAAGACTGGCAGAGGTTCTAACATCAAGCGC
AAATACAAAACTGAGGTGATTGGTACGAAGAAGATTTTGTCTTTTTCCCG
CGATGATGCTGCTGCCGAGAAAGATAAGACTGAGTGGGTTATACACGAGA
TAGCTGTTGAAAATAGCCCTGACTTTGAGAAGGATTTTGTTGTGTGTCGC
CTTGAAAGAAAACGGGAGAAGAAGACGCTTGGTGTTGTTTCCACTAAGAG
AAAACGGGAGAAGAAGACGCTTGGTGTTGTTTCCACTAAGAGAAAGCGGG
AGAAGAAGCTTGGTGTTTCACCAGCGATGGTGATCATCTTTGTCAATTTA
CTT
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