FC868962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21 Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYGPDR +L E P YLTGE PGDYG+D LS P+ F+K + +IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + +++ + ++VL+G E YR+ Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21 Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYGP+R +L E P YLTGE PGDYG+D GLS P+ F+K + +IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + +++ + ++VL+G E YR+ Sbjct: 51 WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + +IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I +++ + +++VL+G E YR+ Sbjct: 21 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRV 148
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 W+GPD +L E P YLTGE PGDYG+D GLS P+ F+K + +IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + +++ + +++L+G E YRI Sbjct: 12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 139
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 56/132 (42.42%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR FL E P YL GE GDYG+D GLS P+ F++ + +IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G + +++ + ++VL+G E YR+ Sbjct: 52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 179
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + +IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I +++ V +++VL+G E YR+ Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRV 176
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR ++L G S P YL+GE PGDYG+D GLS P+ F+K + +IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G + +++ + +++L+G E YR+ Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 176
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + +IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G + +++ + ++VL+G E YR+ Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRV 176
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + +IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + +++ + +++L+G E YR+ Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 177
BLAST of FC868962 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 286 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYTLIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFVVIAEIVLVGGAEYYRI 672 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + +IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + +++ + +++L+G E YR+ Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 177 The following BLAST results are available for this feature:
BLAST of FC868962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868962 ID=FC868962; Name=FC868962; organism=Citrus clementina; type=EST; length=754bpback to top |