FC868963

Overview
NameFC868963
Unique NameFC868963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16A1_RHOS5 (Fructose-1,6-bisphosphatase class 1 1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 2 
Query:  335 IDAELTIVLSSISTACKQIASLVQRAAIS-NLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIY 676
            I A+L  V+  + +   ++A+ + R  I  +L G+ G  N  G+ QK LDV++++ F   L  S      ASEE++  V + E+  G   +  DPLDGSSNID  +S G+IF I+
Sbjct:   11 IPADLQDVMDRLGSVAIEVATRIARGGIDEDLAGLCGT-NTDGDGQKALDVIADDAFRAALEGSA-VRFYASEEQEEAVTLNEA--GTLALAIDPLDGSSNIDTNLSVGTIFAIW 121
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_PELPD (Fructose-1,6-bisphosphatase class 1 OS=Pelobacter propionicus (strain DSM 2379) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 2 
Query:  335 IDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPYD 688
            I   L  ++  I+ A K + + ++   +    G+ G  N+ GE+Q  LDV+S+ +    L+ SG    IASEE +    V  +  G + V +DPLDGSS +D  ++ G+I GIY   D
Sbjct:   23 ISDNLVHLICEIAEASKYVINAIRTGDL----GVAGTSNLYGEEQLALDVLSDRIIRKRLQHSGVVCNIASEEMEEIFQVTSNPQGMFSVAYDPLDGSSLVDVNLAVGTIVGIYQGSD 136
The following BLAST results are available for this feature:
BLAST of FC868963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
F16A1_RHOS55.136e-1136.52Fructose-1,6-bisphosphatase class 1 1 OS=Rhodobact... [more]
F16PA_PELPD8.761e-1133.90Fructose-1,6-bisphosphatase class 1 OS=Pelobacter ... [more]

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Properties
Property NameValue
Genbank descriptionC31007A10EF AbioticL1 Citrus clementina cDNA clone C31007A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868963 ID=FC868963; Name=FC868963; organism=Citrus clementina; type=EST; length=720bp
GGTAACAGAGCATAACAATATCTCCAGCTAGCAAGAAAGCAGAAAGCAGA
GGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTCTCTTT
TCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGTGTCTT
CGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAAGAGAA
GACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGACAACA
TCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACGCTGAC
AAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGAGCTCA
CTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTTCTTTG
GTGCAAAGAGCTGCCATTTCCAACTTGACTGGAATTCAGGGTGCTGTCAA
TGTTCAAGGCGAGGACCAGAAGAAGCTCGACGTCGTTTCAAATGAGGTGT
TCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCGTCAGAG
GAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAACTATAT
TGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTGCAGTGT
CTACTGGATCCATCTTTGGCATATACAGCCCATATGATGAGTGTCTTGCC
GATATTGGTGATGATCCTAC
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