FC868963

Overview
NameFC868963
Unique NameFC868963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_CHRVO (Fructose-1,6-bisphosphatase class 1 OS=Chromobacterium violaceum GN=fbp PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 51/129 (39.53%), Postives = 84/129 (65.12%), Query Frame = 2 
Query:  293 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 673
            TL+ +L++Q++ +G +  EL +++ ++  ACK I+  V + A++++ G  G  N+QGE QKKLDV++N+   +     G    +ASEE ++P  +   Y  G Y+++FDPLDGSSNID  +S G+IF I
Sbjct:    5 TLSRFLIEQQRKAGTLPPELRLLIETVGRACKAISYSVNKGALADVLGEAGTGNIQGEAQKKLDVIANDFLLDANEWGGSLAAMASEEMELPYHIPGEYPKGEYLLMFDPLDGSSNIDVNISVGTIFSI 133
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_ACIAC (Fructose-1,6-bisphosphatase class 1 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:  293 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 673
            +LT +L++Q++  G+I ++L ++L  ++ ACK I+  V + A+  + G   + NVQGE QKKLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +
Sbjct:    6 SLTRYLVEQQRVDGLIPSQLRLLLEVVARACKHISHAVNKGALGGVLGSASSENVQGEIQKKLDIIANEVLIEANEWGGHLAAMASEEMDSIYVVPNRYPQGEYLLLFDPLDGSSNIDVNVSIGTIFSV 134
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_METI4 (Fructose-1,6-bisphosphatase class 1 OS=Methylacidiphilum infernorum (isolate V4) GN=fbp PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21
Identity = 51/133 (38.35%), Postives = 84/133 (63.16%), Query Frame = 2 
Query:  278 SYEIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSN-CLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGI 673
            SY   TL+ +LL+Q + GVID +L  +++ I +ACK +A+ V +  + +   +   +NVQGE+QK LDV++NE+F   C +     G+++ E E   +   E   G Y++++DPLDGSSN+D  ++ GSIF +
Sbjct:    2 SYHRMTLSKFLLEQRKKGVIDPDLGSLINDIESACKYVAAAVSKGKLISQE-VNVTINVQGEEQKPLDVIANEIFLKICEQGDQLQGMVSEEMESPYIIPPEHRRGKYLLIYDPLDGSSNLDVNLTVGSIFSV 133
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_STRMK (Fructose-1,6-bisphosphatase class 1 OS=Stenotrophomonas maltophilia (strain K279a) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 673
            +LT +L++++ +G I+A+L  +++ ++ AC  I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G     ASEE D    V + Y  G+++++FDPLDGSSNID  VS G+IF +
Sbjct:    5 SLTRFLIQEQHAGRINADLRQLIAVVARACTSISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVISNEILLEANAWGGHLAACASEEMDHSQPVPDIYPRGDFLLLFDPLDGSSNIDVNVSVGTIFSV 132
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_STRM5 (Fructose-1,6-bisphosphatase class 1 OS=Stenotrophomonas maltophilia (strain R551-3) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 673
            +LT +L++++ +G I+A+L  +++ ++ AC  I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G     ASEE D    V + Y  G+++++FDPLDGSSNID  VS G+IF +
Sbjct:    5 SLTRFLIQEQHAGRINADLRQLIAVVARACTSISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVISNEILLEANAWGGHLAACASEEMDHSQPVPDIYPRGDFLLLFDPLDGSSNIDVNVSVGTIFSV 132
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_AZOSB (Fructose-1,6-bisphosphatase class 1 OS=Azoarcus sp. (strain BH72) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21
Identity = 51/128 (39.84%), Postives = 81/128 (63.28%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 673
            TLT +L++Q+++G + A+L +++  ++ A K I+  V + A++ + G  G  NVQGE QKKLDV++NE+        G    +ASEE +    +   Y  G Y+++FDPLDGSSNID  +S G+IF +
Sbjct:    5 TLTQFLIEQQRAGRVSADLRLLIEVVARAVKAISVNVSKGALAGVLGEAGTDNVQGEAQKKLDVIANEILLQANEWGGHLAAMASEEVETVHQIPFDYPKGGYLLLFDPLDGSSNIDVNISVGTIFSV 132
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_PSEU2 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPYDECLA 700
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_PSESM (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas syringae pv. tomato GN=fbp PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPYDECLA 700
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_PSEFS (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas fluorescens (strain SBW25) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPYDECLA 700
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141
[Close]
BLAST of FC868963 vs. ExPASy Swiss-Prot
Match: F16PA_PSEF5 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 
Query:  293 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPYDECLA 700
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141
The following BLAST results are available for this feature:
BLAST of FC868963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
F16PA_CHRVO2.458e-2139.53Fructose-1,6-bisphosphatase class 1 OS=Chromobacte... [more]
F16PA_ACIAC2.458e-2141.86Fructose-1,6-bisphosphatase class 1 OS=Acidovorax ... [more]
F16PA_METI43.210e-2138.35Fructose-1,6-bisphosphatase class 1 OS=Methylacidi... [more]
F16PA_STRMK4.192e-2141.41Fructose-1,6-bisphosphatase class 1 OS=Stenotropho... [more]
F16PA_STRM54.192e-2141.41Fructose-1,6-bisphosphatase class 1 OS=Stenotropho... [more]
F16PA_AZOSB4.192e-2139.84Fructose-1,6-bisphosphatase class 1 OS=Azoarcus sp... [more]
F16PA_PSEU25.475e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSESM5.475e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEFS5.475e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEF55.475e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]

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Properties
Property NameValue
Genbank descriptionC31007A10EF AbioticL1 Citrus clementina cDNA clone C31007A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868963 ID=FC868963; Name=FC868963; organism=Citrus clementina; type=EST; length=720bp
GGTAACAGAGCATAACAATATCTCCAGCTAGCAAGAAAGCAGAAAGCAGA
GGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTCTCTTT
TCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGTGTCTT
CGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAAGAGAA
GACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGACAACA
TCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACGCTGAC
AAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGAGCTCA
CTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTTCTTTG
GTGCAAAGAGCTGCCATTTCCAACTTGACTGGAATTCAGGGTGCTGTCAA
TGTTCAAGGCGAGGACCAGAAGAAGCTCGACGTCGTTTCAAATGAGGTGT
TCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCGTCAGAG
GAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAACTATAT
TGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTGCAGTGT
CTACTGGATCCATCTTTGGCATATACAGCCCATATGATGAGTGTCTTGCC
GATATTGGTGATGATCCTAC
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