FC868969

Overview
NameFC868969
Unique NameFC868969
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868969_ssr52 microsatellite FC868969_ssr52:52..66. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.545e-18
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 2
Query:  428 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            L + TF +L  AT  F  DS++G GGFG V+K  +++          G  VA+K L     QG RE++AE++ +G++ H NLV L+GYC   D+RLLVYEFM  GSLE+ L
Sbjct:  868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKD----------GSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVL 968          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18
Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 2
Query:  425 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            Q  +FT+ E+++ T NF  + +LGEGGFG V+ G +  NGT P        +AVK L    +QG++E+ AEV+ L ++HH NLV L+GYC E+    L+YE+   G L+ HL
Sbjct:  559 QTKRFTYSEVEALTDNF--ERVLGEGGFGVVYHGIL--NGTQP--------IAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHL 658          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 2
Query:  428 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKT 772
            LL+    ++  AT +F   +I+G+GGFG V+K  +         PG   TVAVK L     QG+RE++AE++ LG++ HPNLV L+GYC   +++LLVYE+M  GSL++ L  +T
Sbjct:  902 LLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACL---------PGEK-TVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQT 1006          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.116e-17
Identity = 60/188 (31.91%), Postives = 95/188 (50.53%), Query Frame = 2
Query:  221 LKRGVRGS---CKSSASNHSANTIPRTSLVYDAATETRYLNASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKTI 775
            LK  ++G+   C SS+ N   N+I    +   A+        +   +C       SS    P+P+ +       ++T+ E+ + T  F  + +LG+GGFG V+ G+I  NGT          VAVK L P   QG++E+  EV+ L +++H NLV L+GYC E D   L+Y++M  G L+ H    +I
Sbjct:  488 LKLNIQGNPNLCFSSSCNKKKNSIMLPVVASLASLAAIIAMIALLFVCIKRR---SSSRKGPSPSQQSIETIKKRYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYI--NGTEE--------VAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSGSSI 660          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.116e-17
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 2
Query:  437 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            FT+ ELKSAT +F P + LGEGGFG V+KG + +          G  VAVK L     QG  ++VAE+  +  + H NLVKL G C E + R+LVYE++  GSL+  LF
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGPVYKGNLND----------GRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALF 780          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.116e-17
Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 2
Query:  425 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            QLLQ  F  ++ AT +F  D+ LGEGGFG V+KG ++           G  +AVK L     QG  E++ EV  + +L H NLV+L+G+C++ ++R+L+YEF    SL++++F
Sbjct:  328 QLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDY----------GEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIF 430          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.116e-17
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  431 LQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKT 772
            LQF F+ ++ AT  F   +I+G GGFG VF G +           +G  VA+K L     QG RE+  EV  + +LHH NLVKL+G+C+E ++++LVYEF+   SL+  LF  T
Sbjct:  323 LQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-----------NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPT 425          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.487e-17
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 2
Query:  407 DEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            DE S  + L   F+ LK+AT NF  ++ LG GGFG V+KG   +          G  +AVK L  +  QG  E+  E+  L +L H NLV+LIG+CI+ ++RLLVYEF+   SL+  +F
Sbjct:  335 DEFSNTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQ----------GQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIF 443          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.487e-17
Identity = 55/176 (31.25%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  251 SSASNHSANTIPRTSLVYDAATETRYLNASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKTIP 778
            S + +H+++ +P     + +AT++     SN      N +HLS+             C+  +F+  E+K  T NF   +++G GGFG V+KG I+           G  VA+K   P+  QG  E+  E++ L +L H +LV LIGYC E  +  L+Y++M+ G+L  HL+    P
Sbjct:  463 SGSDSHTSSWLPIYGNSHTSATKSTISGKSN------NGSHLSNL--------AAGLCR--RFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVID----------GGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRP 612          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.248e-17
Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 2
Query:  428 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            L +F+F+E+++AT NF P +ILG+GGFG V+KG++           +G  VAVK LK     G  ++  EV+ +G   H NL++L G+C+  ++R+LVY +M  GS+ + L
Sbjct:  285 LKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLP----------NGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRL 385          
The following BLAST results are available for this feature:
BLAST of FC868969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
BRI1_ARATH6.545e-1845.05Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y2289_ARATH8.548e-1842.86Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH8.548e-1842.61Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y1756_ARATH1.116e-1731.91Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH1.116e-1745.87Probable LRR receptor-like serine/threonine-protei... [more]
CRK41_ARATH1.116e-1739.82Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK14_ARATH1.116e-1742.11Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK29_ARATH2.487e-1742.02Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
ANX2_ARATH2.487e-1731.25Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5457_ARATH3.248e-1739.64Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31007B04EF AbioticL1 Citrus clementina cDNA clone C31007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868969 ID=FC868969; Name=FC868969; organism=Citrus clementina; type=EST; length=783bp
GACTTCACTTCTCTTTTCTCTTTCTTCTTCTATTAAACCAATGGCCAGTC
CCCTCCTCCTCCTCCTCTTGTTTACACTTTGTTTTATCATGCAATTATAT
ATGTAAATTACTACTACTCACTGCAACATGTAACGAAACATAGAAATTAC
AATTAACAAACGAATAAAAAAAATATTAATCTTTCATTTCATGGAAACCA
AGTGCGGTTGCTGGGCTTTTCTTAAACGCGGCGTTAGAGGTTCCTGCAAG
TCCTCTGCTTCTAATCACTCTGCTAACACTATTCCTCGTACTAGTCTTGT
TTATGATGCAGCTACTGAGACGCGATACTTGAATGCTAGTAATCGGGAGC
TATGTGCTCCAAATGAAGCTCACTTGTCCTCGGATAATCCTGATCCAGCT
CCTACAGATGAAAAATCACCATGCCAGCTGCTTCAGTTCACTTTTCAGGA
GCTAAAATCAGCAACTGGAAATTTTAGGCCTGATAGTATTCTTGGGGAGG
GTGGATTTGGATATGTCTTCAAAGGATGGATTGAAGAAAATGGGACAGCT
CCGGCAAAACCCGGGTCGGGAATTACAGTTGCTGTTAAGAGCTTGAAGCC
AGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTTG
GGCAGCTTCACCATCCTAATCTTGTTAAGCTTATTGGCTACTGCATTGAA
GATGATCAGCGTCTGCTTGTTTATGAATTCATGACTCGTGGTAGTCTTGA
AAATCATCTTTTTCGAAAGACTATACCTCTTCC
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